Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2195 ATGGCAATGGAGAAGGAACAAGCAAAGGAGGGGTGGATATTCAGGTCGAGGCTTCCGGACATCTACATCCCAAAGCACCTGCCGCTGCACTCCTACTGCTTCGAGAACCTATCGGAGCATGGGGGGCGGCCCTGCCTCATCAATGCCCCAACAGGGCAGGTCTACACCTACTCCGACGTGGACCTCACCGCTCGGAGGGTTGCCTCCGCCCTCCGCCGACTGGGGGTGGGGCAGGGAGACGTGATCATGTTGCTCCTCCCCAATTCCCCCGAATTTGTGTTCGCCTTCCTGGGGGCCTCCCACCGGGGTGCCATCACCACCGCCGCCAACCCCTTCCTCACCCCCTCCGAGATCGCAAAGCAGGCAAAGGCCTCCAGGGCCAAGGTCCTCATCACCCAAGCCTGCTACTCCGACAAGGTCAAGGACTTGGATCACCACCACCTCCTGAAGCTGGTCTTCGTGGACCACGGTACCCCCACCGCCACGCAGGCAGCAGAGACAGAGGGAGATGGCCATCCCCGTGTGCTGCATTTCTCGGAGCTGACGAAGGCATGCGACGAGAATGAGAATGACGATGAGATGGTGAGCAATAGGCATATCAGTCCGGAGGAGGTGGTTGCGCTGCCGTATTCGTCAGGGACGACGGGGCTGCCGAAAGGGGTGATGCTGACGCACAGAGGGCTGGTGACGAGCATAGCGCAGCAGGTGGACGGGGAGAACCCGAACCTGTACTACTCGAGGGAGGACGTGGTGCTGTGCGTGCTGCCGCTGTTCCATATATACTCGCTGAACTCGGTGCTGCTGTGCGGGCTGAGGGCCAAGGCTGCCATACTGCTCATGCCCAAGTTCGAGATCGGGGCCCTCCTCTCTCTCATCCACAAGCACAGGGTCACCATTGCCCCTGTCGTCCCCCCCATCCTCCTCGCCATCGCCAAGTCCCCTCATCTCGACTCCTTTGACCTCTCTTCCATTCGCGTCCTCAAATCTGGCGGTGCCCCTCTCAGCAAGGAACTCGAACACACTCTCAGGGCCAAATTCCCCAACGCCAAACTTGGTCAGGGATATGGAATGACTGAGGCAGGGCCAGTGCTGACAATGTCCTTAGCATTTGCTAAGGAACCAACAGGCGTAAAACCAGGTGCATGTGGAACTGTTGTAAGGAATGCAGAGATGAAGATTGTGGATCCTGAAACCGGCAACTCTTTGCCTCGAAATCAAGCCGGTGAAGTTTGCATAAGAGGGGACCAGATCATGAAAGGTTACCTAAACAATCCAGAGGCGACGGAGAGAACAATAGACAAAGAGGGGTGGCTGCACACGGGGGACATTGGCTACATTGACGACGATGATGAGTTGTTCATTGTTGATAGGCTTAAGGAGCTCATCAAATACAAAGGATTTCAGGTGGCTCCTGCCGAACTCGAAGCCCTTCTTCTCTCTCATCCTTGCATCTTTGATGCTGCTGTCGTTCCAATGAAGGATGAAGCAGCTGGCGAGGTACCTGTTGCATTTGTGGTAAGATCAAATGGTCACGCCGACGTAACCGAGGATGAAATGAAACAGTTTATATCCAAACAGGTGGTGTTTTACAAAAGAATAAACCGAGTATTCTTTATTGATGCAATTCCCAAGTCACCTTCGGGCAAAATCTTACGAAAGGACCTAAGAGCAAAGCTAGCAGCAGGCGTTGCAAATTGA 1698 0.553 MAMEKEQAKEGWIFRSRLPDIYIPKHLPLHSYCFENLSEHGGRPCLINAPTGQVYTYSDVDLTARRVASALRRLGVGQGDVIMLLLPNSPEFVFAFLGASHRGAITTAANPFLTPSEIAKQAKASRAKVLITQACYSDKVKDLDHHHLLKLVFVDHGTPTATQAAETEGDGHPRVLHFSELTKACDENENDDEMVSNRHISPEEVVALPYSSGTTGLPKGVMLTHRGLVTSIAQQVDGENPNLYYSREDVVLCVLPLFHIYSLNSVLLCGLRAKAAILLMPKFEIGALLSLIHKHRVTIAPVVPPILLAIAKSPHLDSFDLSSIRVLKSGGAPLSKELEHTLRAKFPNAKLGQGYGMTEAGPVLTMSLAFAKEPTGVKPGACGTVVRNAEMKIVDPETGNSLPRNQAGEVCIRGDQIMKGYLNNPEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPCIFDAAVVPMKDEAAGEVPVAFVVRSNGHADVTEDEMKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGVAN* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2195 565 Pfam AMP-binding enzyme 35 464 IPR000873 -
Dod10g2195 565 Gene3D - 7 458 IPR042099 -
Dod10g2195 565 Gene3D - 459 562 IPR045851 -
Dod10g2195 565 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 9 560 - -
Dod10g2195 565 CDD 4CL 23 555 - -
Dod10g2195 565 Pfam AMP-binding enzyme C-terminal domain 473 549 IPR025110 -
Dod10g2195 565 ProSitePatterns Putative AMP-binding domain signature. 208 219 IPR020845 -
Dod10g2195 565 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 560 - -
Dod10g2195 565 SUPERFAMILY Acetyl-CoA synthetase-like 19 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2195 Dod-Chr10 43876177 43881613 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2195 3 527 Monolignol Biosynthesis Gene Families AT1G51680 67.362 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2195 K01904 - gmx:547944 840.876