Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2194 ATGGACTCAACAAGTGCACTGTTGCTAGTGATCTTTGTTTCAGTTTCATCAGTACTGTGTTCCCATGGTACTATTATCGTTGCCAAAGATGGGAGTGGAGACTACACAAGTGTGGGTGAAGCTATTAGGAAAGCTCCGGACCTGAGTGACAAACCTTACACCATTCATGTTCGAGCAGGTACTTACGAAGAGTATGTCGTGATTCCTGCTAAGAAGACTAATATTAAGCTCGTTGGCCATGGTCCTACTCCTCGCCACACAAGAATAGTTGGCTACCAAGGTTCCACCATAGATATCCATGGAGAAGGGTTCGTGGCAAAAAACATGGGGTTTGTGAACTCAGCGGGGCTAAAGGCAAGCGGCGCAGTGGCGGTGCGCAACGAGGCAAACAGGACCATATTCTACAGATGCTCCATCGAAGGATTCCAAGACACCTTGTGGGCGGTCTCGGGGCGGCAGTTCTACAAAAACTGCGACATCTACGGCACCGTGGACTTCATCTACGGGGGCGCAGCCGCGGTGTTCCAGGACTGCATGGTGTACGCGCGGTATCGAGAGTTCGTGACCTTCACTGCCCAGTCACGAGAGGACCCGAATGACAACACAGCGTTCACGTTCCAGAGGTGCAAGTTCACCATGTCCCCCGAGGACTCCCAGTCCAATGGGGTGGTGCATGCCACGCTGGGGCGCCCATGGAGGGCGTACTCGAGAGTGGCCATCCTGCAGTGCTTCATAGACTCCATTGTGGACCCCAAGGGCTGGGAGCAGATGCCGGGCCAGCCCACTGACAAGCTCACCTACCTCGAGTTCGACAACGTTGGGCCTGGCTCCAACACTTCCGCCAGGGTTAACTGGCCCGGTGTCCAAGTCCTCACGAACCCCGCTCAAGCAGCCCCTTTCACCGCCTCCCGTCTTTTGGATGCTGCCTCCTGGATTCCCTACACTGGCGTTCCCTACGACGATGGACTCTAG 972 0.5504 MDSTSALLLVIFVSVSSVLCSHGTIIVAKDGSGDYTSVGEAIRKAPDLSDKPYTIHVRAGTYEEYVVIPAKKTNIKLVGHGPTPRHTRIVGYQGSTIDIHGEGFVAKNMGFVNSAGLKASGAVAVRNEANRTIFYRCSIEGFQDTLWAVSGRQFYKNCDIYGTVDFIYGGAAAVFQDCMVYARYREFVTFTAQSREDPNDNTAFTFQRCKFTMSPEDSQSNGVVHATLGRPWRAYSRVAILQCFIDSIVDPKGWEQMPGQPTDKLTYLEFDNVGPGSNTSARVNWPGVQVLTNPAQAAPFTASRLLDAASWIPYTGVPYDDGL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2194 323 Pfam Pectinesterase 25 307 IPR000070 GO:0030599|GO:0042545
Dod10g2194 323 PANTHER PECTINESTERASE 1 322 - -
Dod10g2194 323 SUPERFAMILY Pectin lyase-like 19 321 IPR011050 -
Dod10g2194 323 Gene3D - 21 323 IPR012334 -
Dod10g2194 323 PANTHER PECTINESTERASE 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2194 Dod-Chr10 43868309 43873909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2194 22 323 Carbohydrate Esterase AT3G05620 41.562 2.31e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2194 K01051 - gmx:102665195 460.299