Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2189 ATGGCTAAGATATCACAGAAAAGCCTCAAGAGCAGTGCTGCTGCTAACACCAACAGCGCCACCACCACACCCACCAAGGTGAAGCGGGCACGTAAAAGCATCCCAAGAGACTCTCCCTCACAACGAAGCTCAATTTACCGGGGCGTTACAAGGCATCGATGGACTGGTCGATACGAGGCTCATTTATGGGATAAGAATTGCTGGAATGAATCACAGAGCAAGAAAGGAAGACAAGTATATCTAGGGGCATATGACGATGAAGATGCTGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAACACACCATTCTCAATTTTCCATTATCGAATTATGAAGTCGAGCTTAAGGAGATGGAGAATCAATCGAAAGAAGAATATATCGGATCCTTAAGAAGAAAAAGTAGTGGGTTCTCTCGGGGAGTCTCAAAATATAGAGGCGTAGCAAGACACCACCACAATGGAAGATGGGAAGCGCGAATTGGCAGAGTCTTCGGCAACAAATATCTATACCTTGGAACTTACGCTACACAGGAAGAAGCAGCCACAGCGTATGATATGGCAGCCATAGAGTACCGTGGACTTAACGCAGTTACAAACTTTGACCTTAGTCGTTATGTCAAATGGCTACGCCCTAAAAGCCAAGAACAAGAATCAGACAAGCATAGAAACTCTAGCAGCCCTGATGATGAGTTTGAACTAAGGTTTGTTTCCCATCATCAACTCATCAAGAGCTCAACCACGGGCGATGGCGAGACAACAACAACACAATCCTCCGGCGGTAATGATGGCACGGCGGCCACATCAGCTTCTGCGTTGGGCCTTCTTTTACAATCATCGAAATTCAAAGAAATGCTTGACAGGTCTACTTCAGCTGCACAAACGTGTCCTCCACACCCTTCACAGTCAAGTCCTCCTCGCCGTACGTTCCCCGAAGACATTCAAACATTTTTTGAAACTCACGATTCTGCAAGTTACACGGAGAGTGACGACATTATATTTAGCGACCTGAGCTCGATTATTGCTGCTCCAATTTTTCACTGTGAGCTTGATGCTTAA 1068 0.4625 MAKISQKSLKSSAAANTNSATTTPTKVKRARKSIPRDSPSQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEDAAARAYDLAALKYWGQHTILNFPLSNYEVELKEMENQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYVKWLRPKSQEQESDKHRNSSSPDDEFELRFVSHHQLIKSSTTGDGETTTTQSSGGNDGTAATSASALGLLLQSSKFKEMLDRSTSAAQTCPPHPSQSSPPRRTFPEDIQTFFETHDSASYTESDDIIFSDLSSIIAAPIFHCELDA* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2189 355 MobiDBLite consensus disorder prediction 246 270 - -
Dod10g2189 355 CDD AP2 146 207 IPR001471 GO:0003700|GO:0006355
Dod10g2189 355 SUPERFAMILY DNA-binding domain 44 113 IPR016177 GO:0003677
Dod10g2189 355 ProSiteProfiles AP2/ERF domain profile. 147 205 IPR001471 GO:0003700|GO:0006355
Dod10g2189 355 MobiDBLite consensus disorder prediction 1 28 - -
Dod10g2189 355 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 340 - -
Dod10g2189 355 SUPERFAMILY DNA-binding domain 146 207 IPR016177 GO:0003677
Dod10g2189 355 Pfam AP2 domain 146 197 IPR001471 GO:0003700|GO:0006355
Dod10g2189 355 Pfam AP2 domain 45 103 IPR001471 GO:0003700|GO:0006355
Dod10g2189 355 ProSiteProfiles AP2/ERF domain profile. 45 111 IPR001471 GO:0003700|GO:0006355
Dod10g2189 355 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Dod10g2189 355 PRINTS Ethylene responsive element binding protein signature 187 207 IPR001471 GO:0003700|GO:0006355
Dod10g2189 355 MobiDBLite consensus disorder prediction 290 313 - -
Dod10g2189 355 Gene3D AP2/ERF domain 45 114 IPR036955 GO:0003700|GO:0006355
Dod10g2189 355 Gene3D AP2/ERF domain 146 207 IPR036955 GO:0003700|GO:0006355
Dod10g2189 355 SMART rav1_2 45 117 IPR001471 GO:0003700|GO:0006355
Dod10g2189 355 SMART rav1_2 147 211 IPR001471 GO:0003700|GO:0006355
Dod10g2189 355 MobiDBLite consensus disorder prediction 1 44 - -
Dod10g2189 355 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2189 Dod-Chr10 43815102 43819501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2189 41 209 AP2-EREBP Transcription Factor Family AT5G57390 75.740 1.21e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dod10g2189 AP2 3.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2189 K09285 - rcu:8280276 458.373