Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2174 ATGGATTGTTCTCACAGGGAACTCTTGAAAAGTATGCAAGTTGGGACACTGGAGCCAGAAGTTGCATTCCTCAATTGTTCACTTATTCCAGATGTTTTCCTTGTTCTAGCTCACAAGACACTTGTAGTCAAGTCGCGTGACTCTTTGACCACGCGTACTCTTCATTTAGAGATTGTTTACAATTACTCAGGGTTGGATGATCAGGAATCTAATGTGTCAATGCAATCTAGCACAAGTAGGATGAAGAAACTCAGATTCAATTTACAGGGTCTACCCCTTCCAGGTAGTGGAAGGAAAAATGCATCAAAATCATTTAGGCTAGGGGTGCAAAAGGGATCAGATGGGCTAAGGATATTTGGCAGATCACTCAAAAGTGGAGTCACCTGGGCAGTGTTCCCAGAAGATCTTAAAGTGTCTGAGAAAAAAATATTTGACCCTCAAGATAAGACCCTTCTACAATGGAATAGGTTTTTCCAGATGTTATGTATTTTTTCTGTATCTTGTGATCCCCTCTTCTTTTATCTTCCGTATTTCAATCACAAATCATATTGCCTTGCCATAGATAGCAGGCTAGCAAATTATGCTGTTACAATGAGAACAATATTTGACGCAATTTATCTCCTTCGCATAAGTTTTCAATTCCGCACTGCTTTCATTGCGCCTTCATCTCGGGTATTTGGACGAGGTGAACTTGTCATAAATCCTACAGAGATTGCAAAGAGATATTTGCAACGTTACTTCATTGTTGATTTCATTTCTGTGCTGCCTCTACCACAGATTATTGTGTGGAGGTATCTTCGAAACCCAGGACGCACAAAGGTATTGACCACAAAAATAGCATTGTTGAGAATTGTCATCCTCCAATATCTTCCAAGATTTGCACGCTTTATACCTTTAGCTTCAGAGGTTAGCAAGACGGCTGGTGTTTTTTCCGAAAATGCACTGGTCGGTGCCACATACTACTTGATCTGGTATATGCTTGCTAGTCATATAACAGGGTCTGTGTGGTACTTACTAGCTATAGAACGTAATGATAGATGCTGGAGGAATGCTTGCATGGAAGATGGACGATGTCGCACACATTTCTTGTACTGTGGGAACTCAAATAAGCGTATTCCGGGCTATGAAGATTGGAGAAATATCAGCTCAAAGGTTCTTAGGAGTCAGTGTTCTGTTGATGATGATAACCCAGCATTTAACTATGGAATCTTCACTCAAGCCATACAATCTAGGATTGTTGCATCCATTGATTTCTTTCCTAAACTTTGTTACTGTTTGTGGTGGGGTCTCCAAAACTTAAGCACACTTGGTCAGGGGCTTCTAACCAGTACCTACCCTGGAGAAGTTCTGTTTTCCATAGTAATAGCCATTTTGGGACTTGTCCTTTTTGCTCTTCTTATTGGAAACATGCAGATGAGCCTTGACATGGTTAACTCTCAACAGGGGATGAATGACACCATCTTGAAGCTTTGGCATGATATAACACCAATTTACATGTTCATAGAGGAGGAAGCAGCAGAATCATCAGAGTTTTACGAATCTGATTATGGAGGAGACATTGATGTTACAAGGGCCTTGGTTTCACGTACTGATAGTGACACTTCATCTGCTAGGCCGAGGCTTGGGTTTGATACAACTATCTATGCTTCCCGCTTTGCTGCTAATGCGCTTCATGGTCATAGGCTTCGTGGTTCAAGTTCCAGGGGCATGGGGCTGGGGCTGGAGAAACTCCAAAAGCCCCCAGAACCTGACTTCAGCCATCTTGATTCTCAGTGA 1776 0.4189 MDCSHRELLKSMQVGTLEPEVAFLNCSLIPDVFLVLAHKTLVVKSRDSLTTRTLHLEIVYNYSGLDDQESNVSMQSSTSRMKKLRFNLQGLPLPGSGRKNASKSFRLGVQKGSDGLRIFGRSLKSGVTWAVFPEDLKVSEKKIFDPQDKTLLQWNRFFQMLCIFSVSCDPLFFYLPYFNHKSYCLAIDSRLANYAVTMRTIFDAIYLLRISFQFRTAFIAPSSRVFGRGELVINPTEIAKRYLQRYFIVDFISVLPLPQIIVWRYLRNPGRTKVLTTKIALLRIVILQYLPRFARFIPLASEVSKTAGVFSENALVGATYYLIWYMLASHITGSVWYLLAIERNDRCWRNACMEDGRCRTHFLYCGNSNKRIPGYEDWRNISSKVLRSQCSVDDDNPAFNYGIFTQAIQSRIVASIDFFPKLCYCLWWGLQNLSTLGQGLLTSTYPGEVLFSIVIAILGLVLFALLIGNMQMSLDMVNSQQGMNDTILKLWHDITPIYMFIEEEAAESSEFYESDYGGDIDVTRALVSRTDSDTSSARPRLGFDTTIYASRFAANALHGHRLRGSSSRGMGLGLEKLQKPPEPDFSHLDSQ* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2174 591 Pfam Ion transport protein 154 481 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod10g2174 591 Gene3D - 155 475 - -
Dod10g2174 591 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 532 588 - -
Dod10g2174 591 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 476 - -
Dod10g2174 591 SUPERFAMILY PF0523-like 18 65 IPR036504 -
Dod10g2174 591 MobiDBLite consensus disorder prediction 563 591 - -
Dod10g2174 591 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 532 588 - -
Dod10g2174 591 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 58 476 - -
Dod10g2174 591 Gene3D CGI121/TPRKB 4 69 IPR036504 -
Dod10g2174 591 SUPERFAMILY Voltage-gated potassium channels 146 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2174 Dod-Chr10 43604008 43621813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2174 76 474 Ion Channels AT5G57940 60.349 6.07e-168 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2174 K05391 - gmx:100810453 644.81