Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2169 ATGGATTGTTCACCATGGGTTAACACTTCTTTGGATCTCAACATTAATCCTCACAGAGTTCACGAAGAAGTGCCAATAAAGGAGGTGGAGAGCAATTTTTTCTCACTGGGGATGAGGAAGGCTTCGGTGAAAGAAGAGCCCGCTGGTGCTTTGGTGGAGGAGCTGAAGCGGGTGAATGCAGAAAACAAGAAGTTGACCGAAATGCTCACAGAGATGTGTGAGAGCTACAACACTTTGCGAAGCAACTTGATGGAATATATGAGGAAGAATCCTGATAAGGAGCTCAGCTCATCGAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGTAATCTGGTGGGAGTTAATGGAAACTCTGAGAGCAGCTCAACTGGTGAAGAATCATGCAAGAAACCGAGGGAAGAGACCATCAAAGCAAAGGTCTCCAGGGTTTATGTCAGGACCGAAGCATCTGATACCAGCCTTATTGTGAAAGATGGATATCAGTGGCGGAAATATGGACAAAAGGTGACCAGGGATAACCCTTCTCCAAGAGCCTACTTCAAATGCTCTTTTGCTCCAAGCTGCCCAGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCAGTTCTGGTTGCAACTTATGAAGGAGAGCACAATCATGCCCACCCTTCTCAGATGGAGGCAACATCAGGCTCCAACCGTTGTACGACCCTAGCTTCAGTACCATGTTCAGCTGCCCTTAGCTGTTCCGCACCAAAAGTCACCCTTGAAGTGACAAAATCTAAGTCCAGCAACGAGCCTAAGAATATAAATCCAAAAATCGAATCACCGGAAGTCCCGCAAATTTTGGTGGAACAGATGGCTACTTCCTTGACTAAGGATCCTAATTTCAGAGCAGCACTTGTTGCCGCCATCTCAGGAAGAGTGTTGCACAAGAATTAA 927 0.4563 MDCSPWVNTSLDLNINPHRVHEEVPIKEVESNFFSLGMRKASVKEEPAGALVEELKRVNAENKKLTEMLTEMCESYNTLRSNLMEYMRKNPDKELSSSKKRKSESSNNNSNLVGVNGNSESSSTGEESCKKPREETIKAKVSRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHAHPSQMEATSGSNRCTTLASVPCSAALSCSAPKVTLEVTKSKSSNEPKNINPKIESPEVPQILVEQMATSLTKDPNFRAALVAAISGRVLHKN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2169 308 PANTHER TRANSCRIPTION FACTOR 1 308 - -
Dod10g2169 308 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 308 IPR044810 GO:0003700
Dod10g2169 308 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod10g2169 308 Coils Coil 48 75 - -
Dod10g2169 308 MobiDBLite consensus disorder prediction 91 134 - -
Dod10g2169 308 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod10g2169 308 Gene3D WRKY domain 140 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod10g2169 308 MobiDBLite consensus disorder prediction 102 125 - -
Dod10g2169 308 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod10g2169 308 Pfam WRKY DNA -binding domain 158 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2169 Dod-Chr10 43564093 43565557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2169 4 308 WRKY Transcription Factor Family AT1G80840 53.943 7.12e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod10g2169 WRKY 3.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2169 - - gmx:100798375 452.21