Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2166 ATGGATCCGCAGAACGGACAACCCAACAACATTCCCCAAAGGAACATCCTCTTCAACAAGTACGAGATAGGCAAGTTGCTGGGGCAGGGGAACTTCGCGAAAGTGTACTACGGAAGGAACCTGGCCAGCAACGAGAGCGTGGCCATAAAGGTGATAAAGAAGGAGAAACTGAAGAAGGAGACCCTGATGAAGCAGATCAAGCGCGAGGTGTCCGTGATGCACCTGGTGCGCCACCCCCACATCGTGGAGCTCAAGGAAGTCATGGCCACAAAGGCCAAGATCTTCATGGTCGTCGAGTTCGTCAAGGGCGGCGAGCTCTTCGCCAAGGTCGCCAAGGGCAAAATCAAGGAAGACGCCGCCAGGAAATACTTCCAGCAGCTCATCTCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCACGCACCGCGACCTCAAGCCCGAGAATCTCCTCCTCGACGAGAACGGAGACCTCAAGGTCTCCGACTTCGGCCTCTCGGCGCTGCCGGAACATCGCCGCTCCGACGGCATGCTCGTCACGCCGTGCGGCACCCCTGCTTACGTGGCACCCGAAGTGCTCAAGAAGAAAGGCTACGACGGATCCAAGGCTGATATATGGTCCTGCGGGGTCATCCTCTACGCTCTGCTCTCTGGGTATCTGCCCTTTCAAGGTGAGAATGTTATGAGGATTTACAGGAAGGCCTTCAAGGCCGATTACGCTCTTCCGGATTGGATCTCCCCTGGGGCCAGGAACTTGATCTCCAATCTGCTTGTTGTTGATCCCGAGAAGAGGTATTCTATCGCTCACATAATGAAGGACCCTTGGTTCCAAATTGGGTTCATGAGGCCCATTGCTTTTTCCATCAAGGAGTCCGCTGTTGAAGACAACATCGATTTCAACGAAATGTTGTTGGATGATGGCAGCAGCGGCGCTGAGGTTTTGGTCGGGCCAATGGCGAAGCCCGCCCGCCCTTCTTACAATGCGTTTGAGATTATCTCGTCGCTGTCGAATGGCTTTGATCTGAGGAATTTGTTTGAGACGAGGAAGAGGTCGCCGTCGATGTTTATATCGAAGTTCTCTGCTTCGGCGGTGCTGGGCAAGCTGGAGGCGGTGGCGAAGAAGCTGAATTTCAGGATAACGGGGAAGAAGGAGTTCATGGTGAGGATGCAGGGGGATGCGGAGGGGAGGAAGGGGAAGCTGGCCATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTCTCCAAGTGCGCCGGAGACAGCCTTGAATACATCAAATTCTGCGAGGAGCAAGTTAGGCCTTCCCTTAAAGACATCGTCTGGACATGGCAGGGTGACACCACTCATTCCAATCACCAGTAG 1371 0.5536 MDPQNGQPNNIPQRNILFNKYEIGKLLGQGNFAKVYYGRNLASNESVAIKVIKKEKLKKETLMKQIKREVSVMHLVRHPHIVELKEVMATKAKIFMVVEFVKGGELFAKVAKGKIKEDAARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENGDLKVSDFGLSALPEHRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVMRIYRKAFKADYALPDWISPGARNLISNLLVVDPEKRYSIAHIMKDPWFQIGFMRPIAFSIKESAVEDNIDFNEMLLDDGSSGAEVLVGPMAKPARPSYNAFEIISSLSNGFDLRNLFETRKRSPSMFISKFSASAVLGKLEAVAKKLNFRITGKKEFMVRMQGDAEGRKGKLAMTVEVFEVAPEVAVVEFSKCAGDSLEYIKFCEEQVRPSLKDIVWTWQGDTTHSNHQ* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2166 456 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g2166 456 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Dod10g2166 456 CDD CIPK_C 326 440 - -
Dod10g2166 456 SUPERFAMILY Protein kinase-like (PK-like) 17 276 IPR011009 -
Dod10g2166 456 Pfam NAF domain 324 379 IPR004041 GO:0007165
Dod10g2166 456 Gene3D Kinase associated domain 1, KA1 321 445 - -
Dod10g2166 456 PANTHER CBL-INTERACTING PROTEIN KINASE 16 13 454 - -
Dod10g2166 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Dod10g2166 456 ProSiteProfiles NAF domain profile. 320 345 IPR018451 GO:0007165
Dod10g2166 456 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g2166 456 PANTHER - 13 454 - -
Dod10g2166 456 Gene3D Transferase(Phosphotransferase) domain 1 13 312 - -
Dod10g2166 456 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2166 Dod-Chr10 43533302 43535319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2166 13 456 CBL-interacting serine-threonine protein kinases AT5G10930 60.987 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dod10g2166 Pkinase 6.6e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2166 - - gmx:100804244 728.013