Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2165 ATGGCTGTCACAGGTTCAGGTTCTGTGCAGCCACAATTCATTTCGAGCACTGGCAACCGGAGCTCGTCCAATGCGCCCCTTATTGAGAACTCCGATACTGATCAAATTGTTGTACCTGATAGCAGAAGCTGGAAAAATTTATTTGCGTACATGGGGCCTGGGTTTCTTGTTTCCATTGCATACATAGACCCTGGAAACTTTGAGACAGATCTTCAGTCTGGGGCTCAAAATAAATATGAGTTACTTTGGATCATATTGGGGGCATCATGTGCTGCTCTTTTAATTCAATCGATGGCAGCCAATCTTGGGGTGGTTACCGGAAAGCACTTAGCAGAGCATTGTAGAACTGAATATTCCTGGGTTCCCAACTTTCTTCTTTGGATTATTGCTGAAATTGCTATAGTGGCCTGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTTTTCAACATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGTACTTTGATCCTCTTAGCATTGCAGCAATATGGGGTTAGAAAACTTGAGTTCTTGATTGCATTTCTAGTATTTACAATTGCTGCATGCTTTTTGGTTGAGCTTGGATATGCAAAGCCCGATGCTAAAGAAGTTCTGAAGGGTCTTTTTGTGCCGGAACTGAAAGGAAGTGGTGCCACTGGTCTTGCAATTTCACTTCTTGGGGCTATGGTTATGCCGCACAATCTCTACCTGCACTCAGCTCTGGTACTTTCTCGGAGAATACCGCGATCAGTTCGGGGAATCAAAGAGGCTTGCAGATTTTACCTGATAGAAAGTGGCTTTGCTCTTATGGTGGCCTTCCTCATAAATGTCTCTGTTATTTCTGTAAGTGGTGCTGTTTGCAGTTCTTCAAATTTGAATGCAGAAGATCAGATGAGCTGTCAGGATTTGGATCTGAACAAAGCCTCCTTTCTGCTTAGAAATGTCTCGGGCAAATGGAGTTCAAAACTGTTTGGAGTTGCTTTGCTTGCATCAGGTCAAAGTTCTACTATAACTGGAACCTATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATCTGCGACTGAAGCCATGGATTCGGAATATGTTAACTCGTTGTTTGGCCATAGTTCCTAGTTTGGTTGTCGCAGTCATTGGTGGTTCTGCTGGGGCTGGGAAGCTCATCATAATTGCATCTATGATCCTATCATTTGAGCTTCCCTTTGCTTTAATTCCACTCCTCAAGTTCACAAGCAGCAAAACCAAAATGGGAGAACATGCCAACTCTACCATGGTTTCAGCTGCTACTTGGATCATCGGTTCCCTAATTATGGCCATTAATATATATTATCTACTGACCGGCTTCGTCAAGCTGCTTATTCAGAGTCATGTGGAAGTTGTGGCTAAGGTGTTCTTGGGCATACTAGGATTTTCAGGCATGGCAGTATATATGGCTGGTATAGCATATCTAGTACTCCGCAAGAATAAGAAGGCGGTTACAACTCTTTTGGCACTAACAACACCGGAAAGTCAGCAAATAGCAAATGAACAAGGCAACGCGTCAATCATTTGTCTCCCAAGAGAAGACATAGTGAGCATGCAACTGCCTCAAAGAACTAGTCCCGTTGATCTCGACTGA 1638 0.4365 MAVTGSGSVQPQFISSTGNRSSSNAPLIENSDTDQIVVPDSRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQNKYELLWIILGASCAALLIQSMAANLGVVTGKHLAEHCRTEYSWVPNFLLWIIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIAACFLVELGYAKPDAKEVLKGLFVPELKGSGATGLAISLLGAMVMPHNLYLHSALVLSRRIPRSVRGIKEACRFYLIESGFALMVAFLINVSVISVSGAVCSSSNLNAEDQMSCQDLDLNKASFLLRNVSGKWSSKLFGVALLASGQSSTITGTYAGQYVMQGFLDLRLKPWIRNMLTRCLAIVPSLVVAVIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGEHANSTMVSAATWIIGSLIMAINIYYLLTGFVKLLIQSHVEVVAKVFLGILGFSGMAVYMAGIAYLVLRKNKKAVTTLLALTTPESQQIANEQGNASIICLPREDIVSMQLPQRTSPVDLD* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2165 545 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 MobiDBLite consensus disorder prediction 1 27 - -
Dod10g2165 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 545 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 PANTHER METAL TRANSPORTER NRAMP1 10 545 - -
Dod10g2165 545 Hamap Divalent metal cation transporter MntH [mntH]. 31 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod10g2165 545 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2165 Dod-Chr10 43514456 43520288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2165 15 545 Inorganic Solute Cotransporters AT1G15960 78.236 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2165 K21398 - gmx:100797298 926.006