Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2152 ATGAAGCTCCTTGTTCTGTTCCTGCCCCTTTGGGTGCTGAGCATTTCTCTTTCCTCACCACTTCTTCAAGCGGCATCCTCCATTTATGTTTCTCACTCTTCAGCAAATGCGCAAGCTCCAGGAATTGAGGAGGTTAGAACAGTGCACCACCAGAATTTGAATAAAACAATCCTAGTTGCACTGATTGTTTGTTCTGCTCTTCTTATTGGAATCTTCCTACTGTTATTGTATGCCTGGTGGGGGCACCATAAAAGTTCAAGAAGCTCTAGTTGTAAAAGCCAAGCAACCATAGAGGCTGCAAAAGGGGAAACCTTAAACCCTATTGATGCTAAATTTAACTACTCAAGGATGGCAGACAAGAAGAGTCCAGTTGCTATTTTTGACTTTCAGTTGTTAGAGGCTGCAACAAACAGCTTTAGCAAAAGTAACATCATGGCAGAGAATGGTTCTAGAATTGTTTACAGGGCTCGTTTTGATGAACATTTCCAGGCTGCTGTGAAGAAAGCAGATAGTGATGCTGATAGAGAATTTGAGAATGAAGTGAGTTGGTTAAGCAAGATACGGCATCAGAATATCATAAAACTTATGGGTTATTGTATTCATGGTGAATCAAGGTTTCTTGTTTATGAGTTGATGGAGAATGGATCATTGGAAACTCAATTGCATGGGCCCAATCGTGGATCATCTTTAACTTGGCATCTCCGGTTAAGAATTGCAGTTGATGTTGCCAGGGCATTAGAATATCTTCACGAACACTCCAATCCTTCTGTGGTTCATAGAGATCTAAAATCTTCTAATGTTCTTCTGGATTCTAACTTTAATGCTAAGCTATCAGATTTTGGACTCGCTATAGGTTCAGGCATGCAACACAAGAACATGCAGATGTCAGGAACTTTGGGATATGTGGCACCTGAGTACATATCACATGGTAAACTAACTGATAAGAGCGATGTATATGCTTTTGGGGTTCTCCTTCTAGAACTTCTAACTGGAAGAAAACCCATGGAAAACATGTCCTCAGACCAATACCAATCCCTCGTTTCATGGGCCATGCCTCAGCTAACTGACAGATCGAAGCTTCCAAGTATTCTGGATCCTGTTATAAAAAACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCGGTAGCTGTACTGTGCGTGCAAGCAGAACCAAGTTATAGGCCGCTCATAACAGATGTACTGCACTCCCTCATCCCTTTGGTACAGGTTAAGCTTGGAGGGTCACTCAGAGATACAGAACCAGCTCCCGCAGTCACAGAGAACTCCCACTGA 1296 0.4213 MKLLVLFLPLWVLSISLSSPLLQAASSIYVSHSSANAQAPGIEEVRTVHHQNLNKTILVALIVCSALLIGIFLLLLYAWWGHHKSSRSSSCKSQATIEAAKGETLNPIDAKFNYSRMADKKSPVAIFDFQLLEAATNSFSKSNIMAENGSRIVYRARFDEHFQAAVKKADSDADREFENEVSWLSKIRHQNIIKLMGYCIHGESRFLVYELMENGSLETQLHGPNRGSSLTWHLRLRIAVDVARALEYLHEHSNPSVVHRDLKSSNVLLDSNFNAKLSDFGLAIGSGMQHKNMQMSGTLGYVAPEYISHGKLTDKSDVYAFGVLLLELLTGRKPMENMSSDQYQSLVSWAMPQLTDRSKLPSILDPVIKNTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVQVKLGGSLRDTEPAPAVTENSH* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2152 431 SUPERFAMILY Protein kinase-like (PK-like) 117 405 IPR011009 -
Dod10g2152 431 Gene3D Phosphorylase Kinase; domain 1 103 211 - -
Dod10g2152 431 ProSiteProfiles Protein kinase domain profile. 139 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g2152 431 PANTHER OS01G0253100 PROTEIN 22 418 IPR045271 GO:0004714|GO:0006468
Dod10g2152 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Dod10g2152 431 Pfam Protein tyrosine and serine/threonine kinase 159 372 IPR001245 GO:0004672|GO:0006468
Dod10g2152 431 PANTHER RECEPTOR-LIKE KINASE 22 418 - -
Dod10g2152 431 SMART serkin_6 139 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g2152 431 Gene3D Transferase(Phosphotransferase) domain 1 212 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2152 Dod-Chr10 43395493 43398733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2152 1 351 Receptor kinase-like Gene Family AT1G80640 45.699 7.07e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Dod10g2152 PK_Tyr_Ser-Thr 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2152 - - gmx:100811491 660.603