Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2148 ATGTTCACGCAATTCACCCCAACCACCTTCCTTCCCATACCAGAGATGCTCCATCAAATTCAAGCACCCCAATCACTCAACCTTGTCGTGTCTGAAACGAACCCAACCATAACTCGCTTCCCCTTTGAACCAGTTTCGCAAAGCACTGAAATGACCCTTGAAGGAATCGCTGCCATTGTTGGGAAGCACATTCTCTTCGGAGGCAAAAAAGGCACAAGCGCTAACGACGACAACAGCGTCGTCGACAACCTCAGTGAGCAGAAGAAGGGCGAGAAGACCGGTAACAAAGTGCACAGCGATGATAGCGAGAATGTTGTTTCAGTGAGTAACAAGAGGTACAGAGGAGTGAGGAAGAGGCCCTGGGGGAGGTGGTCGGCGGAGATACGCGACCGGATCGGGCGGTGCCGGCACTGGCTCGGTACATTCGACACGGCGGAGGAGGCGGCTCGTGCTTACGACGCGGCGGCCAGGCGCCTGAGAGGTTCCAAGGCTCGAACCAACTTCGAGATACCGTCGGTGTTGCCGGTTTCGTCGCCGTCGACGTCGTCATCTTCGTCGTCAGATTTGAAGAAGGTGAGCGGCGGCGGCGTCCGCAAGAGGAAAGCCGCGCGCCGCGGTGCTGCTAGGAAATGCTCGGTGGTTACCTCAGTTGCGCAATTGTTCAGTGGTGGGGTTCCTGAAGTTGGAAGAGATCATCATCATCATCATCATGATCATAAACATGGTCATGGTGTGGAGAAAGGGAGTATGGAGCTGGAGTTGAAGCTAGGTGTGATAATTGGTGGTAGAGGCGCTAGTATGGTGGTGTAG 810 0.5457 MFTQFTPTTFLPIPEMLHQIQAPQSLNLVVSETNPTITRFPFEPVSQSTEMTLEGIAAIVGKHILFGGKKGTSANDDNSVVDNLSEQKKGEKTGNKVHSDDSENVVSVSNKRYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFEIPSVLPVSSPSTSSSSSSDLKKVSGGGVRKRKAARRGAARKCSVVTSVAQLFSGGVPEVGRDHHHHHHDHKHGHGVEKGSMELELKLGVIIGGRGASMVV* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2148 269 MobiDBLite consensus disorder prediction 82 99 - -
Dod10g2148 269 MobiDBLite consensus disorder prediction 172 208 - -
Dod10g2148 269 Gene3D AP2/ERF domain 111 170 IPR036955 GO:0003700|GO:0006355
Dod10g2148 269 MobiDBLite consensus disorder prediction 226 247 - -
Dod10g2148 269 MobiDBLite consensus disorder prediction 172 191 - -
Dod10g2148 269 CDD AP2 111 170 IPR001471 GO:0003700|GO:0006355
Dod10g2148 269 SUPERFAMILY DNA-binding domain 112 169 IPR016177 GO:0003677
Dod10g2148 269 SMART rav1_2 112 175 IPR001471 GO:0003700|GO:0006355
Dod10g2148 269 MobiDBLite consensus disorder prediction 71 105 - -
Dod10g2148 269 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 36 231 - -
Dod10g2148 269 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 36 231 - -
Dod10g2148 269 Pfam AP2 domain 112 161 IPR001471 GO:0003700|GO:0006355
Dod10g2148 269 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Dod10g2148 269 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Dod10g2148 269 ProSiteProfiles AP2/ERF domain profile. 112 169 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2148 Dod-Chr10 43355463 43356272 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2148 54 175 AP2-EREBP Transcription Factor Family AT1G80580 57.600 6.49e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod10g2148 AP2 3.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2148 - - qsu:112004510 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2148 10 43355463 43356272 Dod10g2148 10 43355463 43356272 ECH