Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2145 ATGGAGGTGCCGTGGCACAACTTGTTCCCGTACATGGAAATGGAAGATGATGGTGAATTCTTCAACCAACGGCAGAGTAACTCATTCGATGATGAAGAAGTAATGGTTCTTGGAGATATCCTGCTACACTCCGCTGCTTTCTCCTCTGAGAGCGAGAGTCTCTCTCCCCAAACTCAAAACAACTCTGCCACCACCACCACCGCCACGGCCATCGCCGCCGAGGGTGCAGGCAGCGGGACTTTGTCCTTTGACGACAACAATAACAACAGGAAGCGATGCAAAATTCTTAGCAAGAGCAACAGCTCCAACTCCATCGCGTCCCAACTTGCTCCAGAGAAACCTGCGACTTCTTCCCAAAAGTCCTACATTCTGTCTTTCGATGATTCCAACGTTGGGGCAGGGGCTTCAAGCCGCGAAGGTGGTGGTGGCCGGAAGCACCAAGGTGGTGGCAGTGCACGGTGTGCTTCGAGAGGGGCCAACCAGACTCATCAGGGTGGAAAGAAGGGTAGAAACTCTTCGGAGTCATTAGGCCACATCATGGCCGAGAGGAAGAGGAGGCAGGAACTCACCGAGAGATTCATAGCACTCTCAGCCACTATTCCTGGCTTGAAGAAGATTGACAAGGCCTCAATACTTGGTGAAGCAATCAATTATGTCAAACAACTTCAAGAACGGGTCAAAACTCTGGAGGATCAAAGCAGCGAGAAAATAAAAGTAGACTCAGTGTCATTCACCAATAAAGCCGACCTCTACAGTGAGGAAGGCACTGCCTCTAGTAAAACGAGCTCTGATGAGTGCCAGAGACTCAATGTCGCACTCCCTGAAGTTGAAGCAAGAGCCCTGGAAAAGCAAGTGCTCATCCGAATCCACTGCAAGAAACAAAGTGACGAAATGCTCAAGATATTGACCCATCTTAAAAGTTTTGATCTCTCCACAGTAAGCAGTAGCGTCTTGCCATTTGGGAATTCTGCGCTTGACATCACCATTATTGCTCAGATGGGTGGCAAATACAACGCAACCGTGAAGGATCTAGTTAAAAGCCTGAGACTGAGTCTCTTGGAGTCACCTGAGTGA 1074 0.4935 MEVPWHNLFPYMEMEDDGEFFNQRQSNSFDDEEVMVLGDILLHSAAFSSESESLSPQTQNNSATTTTATAIAAEGAGSGTLSFDDNNNNRKRCKILSKSNSSNSIASQLAPEKPATSSQKSYILSFDDSNVGAGASSREGGGGRKHQGGGSARCASRGANQTHQGGKKGRNSSESLGHIMAERKRRQELTERFIALSATIPGLKKIDKASILGEAINYVKQLQERVKTLEDQSSEKIKVDSVSFTNKADLYSEEGTASSKTSSDECQRLNVALPEVEARALEKQVLIRIHCKKQSDEMLKILTHLKSFDLSTVSSSVLPFGNSALDITIIAQMGGKYNATVKDLVKSLRLSLLESPE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2145 357 MobiDBLite consensus disorder prediction 154 171 - -
Dod10g2145 357 Pfam Helix-loop-helix DNA-binding domain 178 223 IPR011598 GO:0046983
Dod10g2145 357 MobiDBLite consensus disorder prediction 99 119 - -
Dod10g2145 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 222 IPR011598 GO:0046983
Dod10g2145 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 178 235 IPR036638 GO:0046983
Dod10g2145 357 Gene3D - 166 238 IPR036638 GO:0046983
Dod10g2145 357 SMART finulus 179 228 IPR011598 GO:0046983
Dod10g2145 357 MobiDBLite consensus disorder prediction 133 175 - -
Dod10g2145 357 PANTHER BHLH TRANSCRIPTION FACTOR 35 355 - -
Dod10g2145 357 Coils Coil 212 239 - -
Dod10g2145 357 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 35 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2145 Dod-Chr10 43331918 43334873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2145 147 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 40.991 3.45e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod10g2145 HLH 8.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2145 - - lang:109342243 329.717