Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2141 ATGGAGGATCTTTGGGACAATTGGTTCTCTGATTTGGACATGGACATCGATGGCACCTTTGATCAATGCCAAGGGAACCCTTTTGTTAACATTGACGAGCAGCAGCAGCAGCCAATGTTGTCTTCAAAAAGCGTAGCAGAAACTCACACTCTGCAATATCCTTCGCGGAATGATCATCACATCAATAATCGTTCATCGTCTTCCTCGAAGAGTAAGAGGAGTCTGAACTTTGAAGAGGGGGAGAGGGAGAGCCAAGGAACAAAGAGGAACAGAAGCGCTTCGGAGGCACAGGATCACATAATGTCGGAGAGAAGAAGGAGACAGCAGATGGCAGAGAGGTTCACAGCACTTGCAGCCATCATACCTGGCTTGAAGAAGATAGACAAGGCCTCTATACTGCGGGAGGCCATTAATTACGTGAAACAACTCCAAGAGCGCATAACAGTGCTGGAACAAGAGAAGGCTGAGCGTAAGACAGAAAGTTCAAAGTCAATTATATGTATCAGGAAATTAAGTGAAGCATATTCAAACGATGACCATCAATCAAATCAAGTGCTCCCCGATGTTGAAGCAATAGGCTTAGAGCTAGAGAAGGAAGTAGTTCTTAGAATCCATTGCGGGAAACGGAAGGGAATCTTGCTCAAGTTGTTGACCCTACTTGAAAATATACATCTCTCTATTGCCAGTAGCAGCGTACTGCCATTTGGCAAAAATACTCTCCACATTACCATCGTTGCTCAGATGGGTGAGGAATACAACTTGAAAGTGAATGAATTGGTGAAAAGCTTGAGACGGGGACTTTTGAAGTTACATGACAACATGGAACTGTGA 831 0.444 MEDLWDNWFSDLDMDIDGTFDQCQGNPFVNIDEQQQQPMLSSKSVAETHTLQYPSRNDHHINNRSSSSSKSKRSLNFEEGERESQGTKRNRSASEAQDHIMSERRRRQQMAERFTALAAIIPGLKKIDKASILREAINYVKQLQERITVLEQEKAERKTESSKSIICIRKLSEAYSNDDHQSNQVLPDVEAIGLELEKEVVLRIHCGKRKGILLKLLTLLENIHLSIASSSVLPFGKNTLHITIVAQMGEEYNLKVNELVKSLRRGLLKLHDNMEL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2141 276 MobiDBLite consensus disorder prediction 52 73 - -
Dod10g2141 276 Pfam Helix-loop-helix DNA-binding domain 98 144 IPR011598 GO:0046983
Dod10g2141 276 Coils Coil 133 160 - -
Dod10g2141 276 SMART finulus 100 149 IPR011598 GO:0046983
Dod10g2141 276 PANTHER BHLH TRANSCRIPTION FACTOR 6 272 - -
Dod10g2141 276 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 6 272 - -
Dod10g2141 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 99 162 IPR036638 GO:0046983
Dod10g2141 276 MobiDBLite consensus disorder prediction 52 108 - -
Dod10g2141 276 Gene3D - 92 169 IPR036638 GO:0046983
Dod10g2141 276 MobiDBLite consensus disorder prediction 74 108 - -
Dod10g2141 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 94 143 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2141 Dod-Chr10 43277044 43279233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2141 85 267 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.487 2.40e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod10g2141 HLH 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2141 - - cam:101501845 206.068