Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2122 ATGTCTCTTGGAAAGGATACTAATTATTCTGCAATACCCGTTAGCTCATATCTAGAACTGCAGCCTCAGGATGATTCACCAAAACCAAAATCCTTCCAAAGGCTCTCCTTTGATGAAACCGAGTATCTGGCGTCCAAGGTTGTCGTTCACGACCACGATGTCGGTGATGATGATGGTGATTTCGAGATTGACATAGATAATTACCCGCTTGTTGTTGTCGGCCACAATCATGGCTCTGGGGTATCTGGGGCTGTGTTTAATTTGACCACCACCATTATTGGGGCAGGGATTATGGCCCTCCCTGCTGCCATGAAAGTTCTAGGAGTGGTTTTGGGGATTGTGATGATCATCCTTATCGGGATCTTGTCTGAAGTTAGTGTAGAGTTGTTATTGCGCTTTTCGGTTCTGTTCAAAGCTTCCTCCTATGGGGAGGTTGTTCAACATGCTATGGGAAGGCCTGCAAGGATTCTTTCTGAAATCTGTATTATAGTGAACAATGCTGGTGTTTTGGTGGTTTACTTGATAATCATGGGGGATGTTATGTCTGGTTCTGTTCATCACTTGGGGGTTTTTGATCAGTTAATGGGGACCGGTGTGTGGGATCAGAGAAAGCTTGTGGTTTTTGTTGTCATGGTGGTTTTCCTCGCCCCGCTTTGTTCCTTGGATAGGATTGATTCGTTGAGCTTGACTTCGGCTGCCTCGGTGGGTCTCGCTGTAGTGTTTGTTGTAGTTACGTTTACTGTTGCTTTCATTAAGCTTGTTGAAGGACGGATCGATGCTCCAAGGATGACTCCTGATTTAAGCTCGAAGGCGGCCATATTGGATTTGCTTGTGGTGATTCCAATCATGACCAATGCATTTGTTTGCCATTTTAATGTGCAACCAATATACAATGAGCTTGCGGGGCGGTCTCCTCAGAAGATGAACCGAGTAGGAAGGATCACCACATCCTTGTGCGTCCTAGTTTATATTTCAACAGCGTTGTCAGGTTATCTACTTTTTGGGAAAGATACAGAGTCTGATGTGCTGACTAATTTCGATGTGGATCTTGGAATTCGGTTTAGCTCAGCCTTGGACTACATTGTCAGGGTTGGCTACATTCTTCATTTGATACTTGTTTTCCCTGTCATTCATTTCTCCCTGCGGCAAACAGTGAATGCTTTGGTGTTTGAGGGATCACCTCCTCTATCAGAGAGCAGGAAGAGATGTTTGGGGCTGACGGCGGTACTGTTGGTCCTCATATATATTGGATCTACCATGATTCCAAACATCTGGACAGCTTTTAAGTTCACAGGGGCAACAACAGCTCTTTCATTGGGTTTTATATTTCCCTCTCTTGTTGCATTGAGATTAGGACATCAAGGGGATTTGAGCCGTGGAGAGCGAATTCTATCATTGATAATGTTGGTATTGGCAGTGATTGTTACCATAGTTGGAATCGTTGGCAGTGTCTATAGCATCCAGAGTAAATCTCAGTGA 1479 0.4449 MSLGKDTNYSAIPVSSYLELQPQDDSPKPKSFQRLSFDETEYLASKVVVHDHDVGDDDGDFEIDIDNYPLVVVGHNHGSGVSGAVFNLTTTIIGAGIMALPAAMKVLGVVLGIVMIILIGILSEVSVELLLRFSVLFKASSYGEVVQHAMGRPARILSEICIIVNNAGVLVVYLIIMGDVMSGSVHHLGVFDQLMGTGVWDQRKLVVFVVMVVFLAPLCSLDRIDSLSLTSAASVGLAVVFVVVTFTVAFIKLVEGRIDAPRMTPDLSSKAAILDLLVVIPIMTNAFVCHFNVQPIYNELAGRSPQKMNRVGRITTSLCVLVYISTALSGYLLFGKDTESDVLTNFDVDLGIRFSSALDYIVRVGYILHLILVFPVIHFSLRQTVNALVFEGSPPLSESRKRCLGLTAVLLVLIYIGSTMIPNIWTAFKFTGATTALSLGFIFPSLVALRLGHQGDLSRGERILSLIMLVLAVIVTIVGIVGSVYSIQSKSQ* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2122 492 PANTHER AMINO ACID TRANSPORTER AVT6E 59 491 - -
Dod10g2122 492 PANTHER AMINO ACID TRANSPORTER 59 491 - -
Dod10g2122 492 Pfam Transmembrane amino acid transporter protein 78 483 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2122 Dod-Chr10 43128372 43130705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2122 6 492 Amino Acid or Auxin Permease AAAP Family AT1G80510 69.734 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2122 - - gmx:100813328 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2122 10 43128372 43130705 Dod10g2122 10 43128372 43130705 ECH