Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2109 ATGGCCGTTAATTCTCTCTCCCTTCTCCCTTATCTGCTTCCACCTTCTTCTTCTTCTTCTTCTTCGTGCTTGTGTGGGGGGATCCATCTCCGCTCCCACAAGAGCTTCCTTTCCATTCACTCAGCTTCTCCTCTTTCTTCTTTCGCCTCCGATTTCAAGTTCTCCGGCGGCAATTCCCGGCGGCGATTTCGCACTGTGGTTGCTGCCTCGGCAGACTACTATTCCACTCTCGGAGTCCCCAAATCCGCCACTGGCAAGGAAATCAAAGCCGCTTATCGAAAGTTAGCTCGACAGTATCATCCTGATGTGAACAAGGAACCTGGGGCAACTGAAAAGTTCAAAGAGATTAGTGCTGCTTATGAGGTGCTATCAGATGATAAAAAGAGGGCTTTGTATGATCAATATGGCGAGGCAGGAGTTAAAAGTACTGTTGGAGGAGGATCAAGTGCCTATACGACTAATCCTTTTGATTTATTTGAGACATTTTTTGGGCCAAGTATGGGTGGCTTTGCTGGCATGGATCCTACTGGATTTGGAACACAACGTCGTAGTACCGTTACTAAGGGTCAAGACATCCGGTATGATTTCTCCTTGAAGTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTTGACCTTTCCCATTTGGAAACATGTGAAGTCTGTACTGGTACCGGAGCAAAGATAGGCTCCAAGATGAGAATATGTTCAACATGTGGTGGGAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGGTTGTTCTCACAGGTTTCAGTTTGCCCAAACTGTGGAGGGGATGGTGAGGTCATATCTGAATATTGCCGTAGATGCAATGGTGAAGGACGAATTCGGGTTAAGAAAAATATCAAAGTTAAAGTTCCTCCTGGTGTTAGCGCAGGCAGTATTCTAAGAGTTGCTGGGGAGGGTGATGCTGGACCAAGAGGGGGCCCTCCAGGAGATCTTTATGTATATCTTGATGTGGAAGAGATACCAGGAATTCAAAGAGATGACATTAATCTCCGCTCGACAATAACAATCAGTTATCTGGATGCCATCCTGGGGGCCATTGTGAAGGTTAAGACAGTTGAAGGCATTTCTGAACTACAAATACCTCCTGGTAGCCAACCTGGAGATGTACTTGTTCTTGCAAGGAAAGGTGTACCAAAACTAAACAAACCATCAATACGTGGTGATCACTTATTTACAGTCAAAGTTACAATACCAAAACGTATTAGTTCAAAGGAGCGCGAGTTGCTTGAAGAACTTGCTTCTCTAGGCGACACAACAAATGGCCGTTCAAAATCCCGTCCTAGAACTAACTCTTCCACAGTAAGTAGGGAAGCTCCTGCAGCTCAAAGGGCTGAGAGTCCAACTGCAACAGCTGCAGAAAAAACTGAACAATCAGAAGACCAGAACAATATATGGAATAAATTGAAGGACTTTGCTGGGTCTGTGGCAAATGGAGCTGTAAAGTGGCTGAAAGATAATCTCTAG 1500 0.4513 MAVNSLSLLPYLLPPSSSSSSSCLCGGIHLRSHKSFLSIHSASPLSSFASDFKFSGGNSRRRFRTVVAASADYYSTLGVPKSATGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFAGMDPTGFGTQRRSTVTKGQDIRYDFSLKFSEAIFGTEKEFDLSHLETCEVCTGTGAKIGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISEYCRRCNGEGRIRVKKNIKVKVPPGVSAGSILRVAGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDDINLRSTITISYLDAILGAIVKVKTVEGISELQIPPGSQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISSKERELLEELASLGDTTNGRSKSRPRTNSSTVSREAPAAQRAESPTATAAEKTEQSEDQNNIWNKLKDFAGSVANGAVKWLKDNL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2109 499 MobiDBLite consensus disorder prediction 425 475 - -
Dod10g2109 499 Gene3D DnaJ domain 69 174 IPR036869 -
Dod10g2109 499 MobiDBLite consensus disorder prediction 460 475 - -
Dod10g2109 499 SUPERFAMILY HSP40/DnaJ peptide-binding domain 187 330 IPR008971 GO:0006457|GO:0051082
Dod10g2109 499 CDD DnaJ_C 190 413 - -
Dod10g2109 499 Gene3D - 335 427 - -
Dod10g2109 499 Pfam DnaJ C terminal domain 192 410 IPR002939 -
Dod10g2109 499 Pfam DnaJ domain 72 133 IPR001623 -
Dod10g2109 499 ProSiteProfiles dnaJ domain profile. 72 136 IPR001623 -
Dod10g2109 499 Hamap Chaperone protein DnaJ [dnaJ]. 69 483 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Dod10g2109 499 CDD DnaJ_zf 219 283 IPR001305 GO:0031072|GO:0051082
Dod10g2109 499 ProSiteProfiles Zinc finger CR-type profile. 206 288 IPR001305 GO:0031072|GO:0051082
Dod10g2109 499 SUPERFAMILY HSP40/DnaJ peptide-binding domain 336 421 IPR008971 GO:0006457|GO:0051082
Dod10g2109 499 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Dod10g2109 499 Gene3D - 189 325 - -
Dod10g2109 499 Pfam DnaJ central domain 219 283 IPR001305 GO:0031072|GO:0051082
Dod10g2109 499 CDD DnaJ 72 125 IPR001623 -
Dod10g2109 499 SUPERFAMILY Chaperone J-domain 68 178 IPR036869 -
Dod10g2109 499 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 206 286 IPR036410 -
Dod10g2109 499 MobiDBLite consensus disorder prediction 428 451 - -
Dod10g2109 499 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 60 442 - -
Dod10g2109 499 SMART dnaj_3 71 128 IPR001623 -
Dod10g2109 499 TIGRFAM DnaJ_bact: chaperone protein DnaJ 72 426 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Dod10g2109 499 PANTHER MOLECULAR CHAPERONE HSP40/DNAJ FAMILY PROTEIN 60 442 - -
Dod10g2109 499 Gene3D - 219 283 - -
Dod10g2109 499 PRINTS DnaJ domain signature 108 128 IPR001623 -
Dod10g2109 499 PRINTS DnaJ domain signature 128 147 IPR001623 -
Dod10g2109 499 PRINTS DnaJ domain signature 92 107 IPR001623 -
Dod10g2109 499 PRINTS DnaJ domain signature 74 92 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2109 Dod-Chr10 42975692 42987735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2109 73 179 C2H2 Transcription Factor Family AT1G74250 36.842 2.43e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2109 K03686 - gmx:100798567 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2109 10 42975692 42987735 Dod10g2109 10 42975692 42987735 ECH