Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2102 ATGAGTTATCAAATTATGGGGTTGTTGAGATGTGGAACCTTGTTGTTGTATGTGCTTCTTCTGAGTAGAACCTGCACGGCCAATGATCAACATATTAGCCAAATATATCCTGGCTTCAGTGCATCTAGGCTAGATTGGGACGACCATAATGGCATGTTCTTGCGATCCAACAACTCAGCTTTCGCTTTTGGATTCTTCGGTGCCTTAGATGTTTCCTTGTTTGTTCTAGTAGTCCTTCACTTAAATAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTTGTTAGGAATTCTAATAAATTTGTGTTTGAACATAGTGGGAATGCTTACTTGGAAGGTGGGAACGGTGTGGTTTGGGCAACAAACACAACAGGACGAAAAGTAAGAGCCATGAAGTTGCAGGACTCAGGGAATTTGGTGTTGATTGGGGAAAATGGGACCCCAATTTGGCAGAGTTTTGACCATCCCACTGATACCCTTCTGCTCGGTCAATCATTTGTGGAAGGAATGACACTCAAAAGCTTTTCCAACAGCAGGAACTTGTATAATTTTCTTGGTTATATGGCAGGTGATTTGGTCCTCTATGCAGGATTTGATCCCCCACAACTGTACTGGTCTTTATCCAGGGATGTCCAGATTGGAGGCCATAAAAATTTCAGTGGCAAGGTTCATTCTGCTTCTCTGGTGTCCAATTCGTGGAATTTCTATGACAAAGGTGGGGATTTGCTAGGGAAAACTGTCTTCTCTGATAGTTCAGATCCCAAATCATTTTGGGCCGCTATTTTGGACCCTACTGGTGCTATCGCTTTCTATGATCTTAACAAGAAGAGGGGTGCTCCACCTGAGGCAAGAAAAATACCAGAAGACCCTTGTGGGATTCCTGAGCCTTGTGATCCTTACTATGTTTGCTTCTTTGAGAACTGGTGTGAATGCCCTGCACTTCTCAAATCTAATTTTAACTGCAAGCCTCCGAACATCTCTACCTGTTCTAGGACTTCAACAGAACTTCTATATGTTGGTGAGAAGCTTGATTATTTTGCACTTGATTATGTTGCACCTGTTTCAAAAAAATCAACCCTGAATGCTTGTAAGGAAACCTGTTTGGGAAACTGCTCATGCCTAGTGCTTTTCTTTGAAAACAGCACTGGGACATGCTTCCATTTTGATCAGACTGGAAGCTTCCAACGCTCTAAGGGGGGGACCAGTGGTTATATTTCATTTATGAAGGTCTCCACTGATGATGGAAATGGCAACAAAGAGGGAAAGAATGGCGTGCTGGTAGTCGTTGCCATAGGAGTTCTTACAGTTCTGGTTATTGTTGGTCTTATTACAGCATTTTGGTACTATAAGAAGAAGAAGGATTTTGCTAAGTATCGACAAGACACCTTGGAGGATGATGATTTCTTGGATGGTCTTGCCGGAATGCCTACCCGGTTTACTTATAGTGCTCTATCAAATCTAACAAAGAACTTCTCCACAAAAATTGGCGAGGGAGGTTTCGGTTCAGTGTATCTTGGTGAGCTTGAAGATGGAACACAGTTGGCTGTGAAAAAATTGGAAGGTGTTGGACAAGGGACAAAGGAATTTAAAGCTGAAGTGTCTATCATTGGAAGCATTCATCATGTTCATCTGGTCAAGCTGAAAGGCTTCTGTGCTGAGGGTCCTCATCGCCTTCTTGTCTATGAATACATGGGGAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGAAAACACTTTCTTATTGAATTGGGATACAAGGTTCAACATTGCAATAGGCACGGCAAAGGGACTGGCCTATCTTCATGAGGAGTGTGAAGTGAAGATCATCCACTGTGATATTAAGCCACAAAATGTTCTTCTTGATGATAATTTCACAGCCAAAGTTTCGGATTTCGGATTGGCCAAACTAATGAGCCGAGAACAAAGCCATGTCTTCACAACTCTAAGGGGCACAAGAGGGTATCTAGCACCAGAATGGATTACTAACTATGCAATTTCCGAGAAGAGTGATGTATTCAGCTATGGCATGGTCTTGCTTGAGATAATTGGAGGGAGGAAGAACTATGATCAATGGGAAGGCTCAGAGAAAGCGCATTTTCCTTCTTATGTCTTCAGAATGATGGACGAAGGAAAACTGATAGAGGTTCTTGACAGTAAGATAGATATTGATGAGAAGGATGAAAGGGCTGTGACTGCTCTTAAGGTTGCCCTCTGGTGTATACAAGATGATGTGAGTTTGAGGCCTTCCATGACCAAGGTCGTTCAAATGCTTGAAGGTCTCTGCCCTGTGCCTGATCCACCATCATTATCTCAATCTGGTTCTTACTCAGCTTTCCTGAAAATGAGTAGTGGAGAAGCTACTTCATCAGGACAGGCAAGTTTTTATAGTAATGTACCACTGTCGTGTGTTCAGTTATCAGGACCTAGATGA 2439 0.4268 MSYQIMGLLRCGTLLLYVLLLSRTCTANDQHISQIYPGFSASRLDWDDHNGMFLRSNNSAFAFGFFGALDVSLFVLVVLHLNSYKVVWTANRGLLVRNSNKFVFEHSGNAYLEGGNGVVWATNTTGRKVRAMKLQDSGNLVLIGENGTPIWQSFDHPTDTLLLGQSFVEGMTLKSFSNSRNLYNFLGYMAGDLVLYAGFDPPQLYWSLSRDVQIGGHKNFSGKVHSASLVSNSWNFYDKGGDLLGKTVFSDSSDPKSFWAAILDPTGAIAFYDLNKKRGAPPEARKIPEDPCGIPEPCDPYYVCFFENWCECPALLKSNFNCKPPNISTCSRTSTELLYVGEKLDYFALDYVAPVSKKSTLNACKETCLGNCSCLVLFFENSTGTCFHFDQTGSFQRSKGGTSGYISFMKVSTDDGNGNKEGKNGVLVVVAIGVLTVLVIVGLITAFWYYKKKKDFAKYRQDTLEDDDFLDGLAGMPTRFTYSALSNLTKNFSTKIGEGGFGSVYLGELEDGTQLAVKKLEGVGQGTKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMGRGSLDKWIFKNSENTFLLNWDTRFNIAIGTAKGLAYLHEECEVKIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMVLLEIIGGRKNYDQWEGSEKAHFPSYVFRMMDEGKLIEVLDSKIDIDEKDERAVTALKVALWCIQDDVSLRPSMTKVVQMLEGLCPVPDPPSLSQSGSYSAFLKMSSGEATSSGQASFYSNVPLSCVQLSGPR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2102 812 SUPERFAMILY Protein kinase-like (PK-like) 475 761 IPR011009 -
Dod10g2102 812 SMART blect_4 45 157 IPR001480 -
Dod10g2102 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Dod10g2102 812 Gene3D - 48 156 IPR036426 -
Dod10g2102 812 Gene3D Phosphorylase Kinase; domain 1 457 564 - -
Dod10g2102 812 ProSiteProfiles Protein kinase domain profile. 490 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g2102 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 812 - -
Dod10g2102 812 CDD B_lectin 50 157 IPR001480 -
Dod10g2102 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 208 IPR036426 -
Dod10g2102 812 ProSitePatterns Protein kinases ATP-binding region signature. 496 519 IPR017441 GO:0005524
Dod10g2102 812 Gene3D Transferase(Phosphotransferase) domain 1 565 766 - -
Dod10g2102 812 PIRSF SRK 5 808 IPR024171 GO:0004674
Dod10g2102 812 CDD STKc_IRAK 496 763 - -
Dod10g2102 812 ProSiteProfiles PAN/Apple domain profile. 330 412 IPR003609 -
Dod10g2102 812 Pfam D-mannose binding lectin 86 167 IPR001480 -
Dod10g2102 812 ProSiteProfiles Bulb-type lectin domain profile. 39 155 IPR001480 -
Dod10g2102 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 7 812 - -
Dod10g2102 812 SMART serkin_6 490 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g2102 812 Pfam Protein kinase domain 493 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2102 Dod-Chr10 42888040 42891440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2102 435 770 Receptor kinase-like Gene Family AT5G20050 45.098 1.69e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod10g2102 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2102 - - gmx:100786024 1303.5