Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2048 ATGAAGAAAGAAAATAGTGTAACCTTGAAAGCTGGAGATCTCCCTGGTAGATTGACTCGTGCCCGAGCTGCTGCTCTTTGCAAATCTGGACAGTTGCCCCCTTTGAAGGGGGTATCACAACAAAGTCACAAGCAGATCTTAGAAGCCAATACAAAAAGAGCAGTTTCAGACAACACATGTCTTCCACGTAAAAAGAGGGCTGTTCTTCAGGATGTCAGTAACATTCGGTGTGAAAATACACCGAGGAGATGTTTGAATGAAACTAAAATTCAGGCTAAGAAAAGCAAGCTGGATAAGGCTGGGGAGCTACCACAACTACAAGTTGACTCAAAAGGGAAGAATTTGCCAGAAATAAAGCTTAGATCAGAAGATGCTATGTGCTCAGTTAATTTGGAGGATAATGCACTTCTTCGGCTGAGTGTCAACCAGTGTGGTGCAGATAATACTCTGCTTGATAGTCAGACATCTGGAATATCTTCTCAGTCTCTGATTTCTCTAAAGAAACGTGTACAAATTGTTGCAGCCAAGAAAATTAGCCTTTTTGAAGTTCTAAATGCATCAAAGGATCCCGATGTCATTAATATAGATGCTGATTTTGAAGATCCTCAATTGTGCAGCCTCTATGCCACTGATATCTATGACAACTTGCGTGTTGCTGAGCTGTCAAGAAGGCCTTATCCTAACTATATGGAAACAGTACAGCGAGACATCACTCAAAGCATGCGCAGGATACTGGTTGATTGGCTTTTAGAGGTTTCTGAGGAATACACATTGGTCCCAGACTCTCTTTACCTCACTGTTTATCTCATAGATTGGTTTCTCTCCAAAAATTACATTGAAAGACAAAGACTTCAGCTGCTTGGCATCACCTGCATGCTAATTGCCTCGAAGTATGAAGAAATTAATGCCCCGCGTATTGAAGAATTCTGCTTCATCACAGACAACACATACACAAAAGAAGAGGTACTGAAAATGGAGACCCAAGTGTTAAAGTCCTCTGCATATCAACTATTTGCTCCCACAACAAAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCACAAGCTTCTTACAAGAGCCCTAGATTTGAATTGGAGTACCTTGCCAATTATCTCGCCGAACTAACACTCATGAACTATGATTTCTTAAATTTCCTTCCTTCTTTGATTGCGGCATCTGCTGTATTTCTTGCCAGATGGACATTGGATCAATCAAGCCACCCATGGAATCCAACTCTTCAACACTACGCTTCGTACAAGTCTTCAGATTTGAAAACCACAGTTCTTGCGTTGCAGAATCTACAGCTGAATAGCAATGGCTGCCCTTTAACTGCCATTCGCACTAAGTATAGGCAAGATAAGTTTAAATGTGTAGCAGCTTTGCCTTCCCCGGAACTGCTTGACACTCTCTTCTGA 1413 0.4176 MKKENSVTLKAGDLPGRLTRARAAALCKSGQLPPLKGVSQQSHKQILEANTKRAVSDNTCLPRKKRAVLQDVSNIRCENTPRRCLNETKIQAKKSKLDKAGELPQLQVDSKGKNLPEIKLRSEDAMCSVNLEDNALLRLSVNQCGADNTLLDSQTSGISSQSLISLKKRVQIVAAKKISLFEVLNASKDPDVINIDADFEDPQLCSLYATDIYDNLRVAELSRRPYPNYMETVQRDITQSMRRILVDWLLEVSEEYTLVPDSLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYTKEEVLKMETQVLKSSAYQLFAPTTKTFLRRFLRAAQASYKSPRFELEYLANYLAELTLMNYDFLNFLPSLIAASAVFLARWTLDQSSHPWNPTLQHYASYKSSDLKTTVLALQNLQLNSNGCPLTAIRTKYRQDKFKCVAALPSPELLDTLF* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2048 470 PIRSF Cyclin_A_B_D_E 20 469 IPR039361 -
Dod10g2048 470 Gene3D - 225 338 - -
Dod10g2048 470 Pfam Cyclin, N-terminal domain 211 332 IPR006671 -
Dod10g2048 470 SMART cyclin_7 344 432 IPR013763 -
Dod10g2048 470 SMART cyclin_7 247 331 IPR013763 -
Dod10g2048 470 CDD CYCLIN 340 430 IPR013763 -
Dod10g2048 470 SUPERFAMILY Cyclin-like 200 332 IPR036915 -
Dod10g2048 470 PANTHER CYCLIN-A2-4 45 470 - -
Dod10g2048 470 PANTHER CYCLINS 45 470 IPR039361 -
Dod10g2048 470 CDD CYCLIN 241 330 IPR013763 -
Dod10g2048 470 Pfam Cyclin, C-terminal domain 340 462 IPR004367 -
Dod10g2048 470 SMART Cyclin_C_2 340 463 IPR004367 -
Dod10g2048 470 Gene3D - 211 459 - -
Dod10g2048 470 SUPERFAMILY Cyclin-like 340 465 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2048 Dod-Chr10 42295982 42302591 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2048 1 470 Core Cell Cycle Gene Families AT1G80370 52.842 1.17e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2048 K06627 - gmx:100793657 661.759