Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2043 ATGTGCTCAGTTAATTTGGAGGATAATGCACTTCTTCGGCTGAGTGTCAACCAGTGTGGTGCAGATAATACTCTGCTTGATAGTCAGACATCTGGAATATCTTCTCAGTCTCTGATTTCTCTAAAGAAACCCAAGAAAATTAGCCTTTTTGAAGTTCTAAATGCATCAAAGGATCTCGATGTCATTAATATAGATGCTGATTTTGAAGATCCTCAATTGTGCAGCCTCTATGCCACTGATATCTATGACAACTTGCGTGTTGTTGAGCTGTCAAGAAGGCCTTATCCTAACTATATGGAAACAGTACAGCGAGACATCACTCCAAGCATGCGCAGGATACTGGTTGATTGGCTTTTAGAGGTTTCTGAGGAATACACATTGGTCCCAGATTCTCTTTACCTCACTGTATATCTCATAGATTGGTTTCTCTCCAAAAATTACATTGAAAGACAAAGACTTCAACTGCTTGGCATCACCTGCATGCTAATTGCCTCGAAGTATGAAGAAATTAATGCCCCGTGTATTGAAGAATTCTGCTTCATCACAGACAACACATACACAAAAGAAGAGGTACTGAAAATGGAGACTCGAGTGTTAAAGTCCTCTGCATATCAACTATTTGCTCCCACAACAAAAACTTTCCTCAGGTACTTAGTATTACTAATCACTTGCCTCATGAAAAACTTGCAGAGCCCTAGCTGTGAATTGGAGTACCTTGCCAATTATCTCGCCGAACTAACACTTATGAACTATGATTTCTTAAATTTCCTTCCTTCTTTGATTGCGGCATCTGCTGTATTTCTTGCCAGCTGGACATTGGATCAATCAAGCCACCCATGGAATCCAACTCTTCAACACTACGCTTCATACAAGTCTTCAGATTTGAAAACCACAGTTATTGCGTTGCAGAATCTACAGCTGAATAGCAATGGCTGCCCTTTAACTGCCATTCGCACTAAGTATAGGCAAGATAAGAAGACAACAGAAGAGAGAGAGACCCATAAAAAGATGGCGACTTTGAATGTGTTATCTCAGCCATGGCAACCTAAAGTAGTTTCATCTTCTTTCTGTTGTTCTAACTACACTAACAACTATGCCTATTCCTATAATCATTCTAATAAAAATTGTAAATCACCTCAGTCTTCCAATTCCCGACACTTCTCTGTTCTGTCTTCCCAATCAAACTCTTCTAAGCTCCCTCAATTCCCAACACACTTCTCAAACTCAGGCAGTGGAAGTTCATGGCTGCAAAACAGTTCCAATGCTGCCAGCATTGTGTACAGGAAGTGTCCTTTATATTCTGTGTTTCCCACAAAGCCTGCAGAAGTTTCCTCTGTGCAAGACCTTTTTGAATTTATTTGCTCAGGGCCTTTGGTCGACAAAATTGGTCTGACACAAGAGAAGGTGGCCGAGTCCATTGATAAGTGGTTATCATATGGTCAACTACTATGCCGACTGTTTCAACTTAATGAACTGTACCTTACAGAACCTCAAAAAGCAAGGATTTATCACTACTATATACCAGTCTTCTTCTGGTGTGAAGATCAGATTGCTCAGCATCAGTCCAAGTTCAAAGATGGGGAAGATATACCCCCTTTAGTGATTGGATTTAGTGCTCCTCAAGGATGTGGAAAGACAACCCTTGTCTTTGCTCTTGACTATCTTTTCCAAAATACTGGCAGGAAGTCAGCAACAATATCTATAGATGATTTTTATTTGACAGCTGAAGATCAGAATAAACTAAGAGAAGCTAATCCAGGAAATGCACTTCTTGAGTTCCGTGGAAATGCAGGAAGCCATGATCTTGCTTTTTCTATTGAAACTTTGACAGCTTTAACCAAAATGACAAAAGAAGGTGAGTCTCTGTACTCAATGTTTTTCTCTCTACTAAATTATATTTTATGCGTAATTCCTTGTTATTTGAAGTGTGCAGGTATGAAGATGAAGTTACCAAGATATGATAAATCCGCATTCAATGGGAGAGGTGACCGTGCTGATCCTTCAGCATGGCCAGAAGTTGAAGGGGCCCTTAAGGTTGTGTTGTTTGAAGGTTGGATGCTTGGTTTCAAGCCCCTTCCTGTTGAGGCTGTAAACGCCGTTGATCCCCAGCTAGAAACTGTAAATAAAAACCTTGAAGCTTATTATGATGCTTGGGACAAATACGTAAAGTCATGGATAGTCATCAAGATTAATGACCCAAGTTGTGTCTACCAATGGCGCTTGCAGGCTGAGATTGCCATGAGGGAGGCAGGCAAACCAGGAATGTCTGATGATGAGGTTAGAGATTTTGTTTCTCGCTACCTGCCAGCATACCATGCATACCTTCCTACACTTTACTCGGAGGGTCCTAATGGATCAGATCATCAACATCTCCTAACCATTGATATTGATGAAAAGAGAAACCCCATCCTTGCGGCCTATTAG 2424 0.4076 MCSVNLEDNALLRLSVNQCGADNTLLDSQTSGISSQSLISLKKPKKISLFEVLNASKDLDVINIDADFEDPQLCSLYATDIYDNLRVVELSRRPYPNYMETVQRDITPSMRRILVDWLLEVSEEYTLVPDSLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPCIEEFCFITDNTYTKEEVLKMETRVLKSSAYQLFAPTTKTFLRYLVLLITCLMKNLQSPSCELEYLANYLAELTLMNYDFLNFLPSLIAASAVFLASWTLDQSSHPWNPTLQHYASYKSSDLKTTVIALQNLQLNSNGCPLTAIRTKYRQDKKTTEERETHKKMATLNVLSQPWQPKVVSSSFCCSNYTNNYAYSYNHSNKNCKSPQSSNSRHFSVLSSQSNSSKLPQFPTHFSNSGSGSSWLQNSSNAASIVYRKCPLYSVFPTKPAEVSSVQDLFEFICSGPLVDKIGLTQEKVAESIDKWLSYGQLLCRLFQLNELYLTEPQKARIYHYYIPVFFWCEDQIAQHQSKFKDGEDIPPLVIGFSAPQGCGKTTLVFALDYLFQNTGRKSATISIDDFYLTAEDQNKLREANPGNALLEFRGNAGSHDLAFSIETLTALTKMTKEGESLYSMFFSLLNYILCVIPCYLKCAGMKMKLPRYDKSAFNGRGDRADPSAWPEVEGALKVVLFEGWMLGFKPLPVEAVNAVDPQLETVNKNLEAYYDAWDKYVKSWIVIKINDPSCVYQWRLQAEIAMREAGKPGMSDDEVRDFVSRYLPAYHAYLPTLYSEGPNGSDHQHLLTIDIDEKRNPILAAY* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2043 807 SMART cyclin_7 216 304 IPR013763 -
Dod10g2043 807 SMART cyclin_7 116 200 IPR013763 -
Dod10g2043 807 Gene3D - 509 806 IPR027417 -
Dod10g2043 807 Gene3D - 94 207 - -
Dod10g2043 807 PANTHER URIDINE KINASE 641 805 - -
Dod10g2043 807 PANTHER URIDINE KINASE 414 619 - -
Dod10g2043 807 Pfam Cyclin, C-terminal domain 209 325 IPR004367 -
Dod10g2043 807 CDD CYCLIN 235 294 IPR013763 -
Dod10g2043 807 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 532 797 IPR027417 -
Dod10g2043 807 Gene3D - 80 325 - -
Dod10g2043 807 PANTHER BNAC06G40610D PROTEIN 641 805 - -
Dod10g2043 807 PANTHER BNAC06G40610D PROTEIN 414 619 - -
Dod10g2043 807 SMART Cyclin_C_2 209 343 IPR004367 -
Dod10g2043 807 SUPERFAMILY Cyclin-like 209 325 IPR036915 -
Dod10g2043 807 CDD CYCLIN 110 199 IPR013763 -
Dod10g2043 807 SUPERFAMILY Cyclin-like 69 201 IPR036915 -
Dod10g2043 807 Pfam Cyclin, N-terminal domain 80 201 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2043 Dod-Chr10 42219127 42227409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2043 62 325 Core Cell Cycle Gene Families AT1G80370 70.076 4.43e-130 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2043 K15918 - gmx:100806896 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2043 10 42219127 42227409 Dod10g2043 10 42219127 42227409 ECH