Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2023 ATGGGTGTGAACTCCAACAGAGTGGAGCACTTTGATTGCCATGAACAACAACAGCAAACCACCATCAAAATCCAAGACGACGAGGACATGCCAATGCCTCCGTTGCAAATCCACAAGGTTCAGCTGCCACCAGAGAGGACCACACTCCTGAAACTAAGGCAAAGGTTGTCTGAAATCTTCTTCCCAGATGACCCACTTCACGGTTTCAAGAACCAAACATGGTTCATGAAGCTGCTTCTGGGACTTCAATACTTGTTCCCTATTTTGCAATGGGGTCCGAATTACAGCCTTGCCCTTCTACGCTCTGATGCCATCTCTGGCCTCACCATTGCTAGCCTTGCCATTCCTCAGGGAATCAGTTATGCAAAACTTGCAAACCTGCCACCTATTGTTGGATTATATTCGAGTTTTGTGCCTCCATTGATATATTCGCTGCTTGGGAGTTCTAGGCATCTTGGTGTTGGTCCAGTTTCAATTGCGTCTTTGGTTATGGGATCAATGTTGAGTGAGCAAGTTTCTTACACACAAGATCCAATTCTCTATCTGAAATTGGCCTTCACAGCCACTTTCTTTGCTGGTTTGTTCCAAGCTTCTCTTGGTCTATTAAGGTTAGGCTTTATAATTGATTTTCTGTCAAAGGCAACGCTGGTGGGTTTCATGGCGGGTGCAGCGATCATAGTGTCACTGCAGCAGCTTAAAGGGTTACTTGGAATCGTGCACTTTACCAGCAAGATGCAAATATTCCCTGTACTCATCTCTGTTTTCAAGCAAAGACACGAGTGGTCATGGCAAACAGTTGTACTGGGGTTTGGCTTCTTGACCTTCTTGCTGATAACAAGGCACATTAGCTTGAGGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCCCCTTTGACATCAGTTATTTTGTCAACCATTTTAGTCTTTCTTCTGAGAAATAAGGCTCATCAAATTGCAATTATCGGGAACTTACCAAAGGGCCTTAATCCACCATCTTCAAACATGTTATACTTCAATGGTGCTTACTTGGCTCTTGCTATCAAAACTGGCATTGTCACAGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGTAGAACATTTGCAGCACTCAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATCGGTGTTATGAACATAGCTGGCTCATGTTCTTCATGCTATGTGACAACAGGATCCTTTTCTCGATCCGCCGTTAACTATAATGCTGGAGCACAGACAGCAGTTTCAAACATAATCATGGCTGCAGCAGTTCTAGTTACCCTTCTGTTTCTCATGCCACTCTTCTACTATACACCAAATGTTGTCTTAGCAGCCATTATCATCACTGCGGTGATTGGCCTAATAGATTTTCAAGGTGCATATAAATTGTGGAAGGTTGATAAACTTGATTTCTTCGCCTGTTTGTGCTCCTTTTTTGGGGTTCTCTTCATTTCAGTGCCTTTAGGCCTTGGTATAGCGGTTGCAATATCAGTCTTCAAGATCTTGCTTCATGTCTCTCGACCAAACACTTTGGTTTTGGGGAATATAACTGGAACACAAATATTCCACAACCTAAACCAATACAAAGAAGCTATGAGAATTCCTTCGTTTCTTATTATGGCCGTTGAGTCTCCAATCTATTTTGCCAATTCAACTTACATTCAAGAAAGGATACTGAGATGGGTTCGTGAAGAGGAAGAGCGAATAAAAGCAAATAATGGAAGCTCATTGAAGTGTATAATTTTAGACATGACAGCTATCACAGCCATAGACACAAGTGGGCTTGACACATTATGTGAACTTAGAAAGATGCTGGATAAAAGATCACTTCAGGTACAGACACTAATTGAAACATTGATTGGACAAGGCCTAAAATACTATCTAAGTTCTACTTCTAATGTCTACATTACAATTGTGTACTTGCAGCTTGTGCTGGCAAACCCTGTTGGAAATGTGATGGAAAAGTTGCATACATCAAGAGTTTTGGATTCCTTTGGATTGAAAGGTGTCTATCTCACAGTTGGAGAAGCTGTGGCCGACATTTCATCATCCTGGAAAGCTCAGCCTTAA 2082 0.4222 MGVNSNRVEHFDCHEQQQQTTIKIQDDEDMPMPPLQIHKVQLPPERTTLLKLRQRLSEIFFPDDPLHGFKNQTWFMKLLLGLQYLFPILQWGPNYSLALLRSDAISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSEQVSYTQDPILYLKLAFTATFFAGLFQASLGLLRLGFIIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTSKMQIFPVLISVFKQRHEWSWQTVVLGFGFLTFLLITRHISLRKPKLFWVSAAAPLTSVILSTILVFLLRNKAHQIAIIGNLPKGLNPPSSNMLYFNGAYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGVMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDFQGAYKLWKVDKLDFFACLCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNITGTQIFHNLNQYKEAMRIPSFLIMAVESPIYFANSTYIQERILRWVREEEERIKANNGSSLKCIILDMTAITAIDTSGLDTLCELRKMLDKRSLQVQTLIETLIGQGLKYYLSSTSNVYITIVYLQLVLANPVGNVMEKLHTSRVLDSFGLKGVYLTVGEAVADISSSWKAQP* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2023 693 Pfam Sulfate permease family 100 479 IPR011547 GO:0016021
Dod10g2023 693 Pfam STAS domain 532 616 IPR002645 -
Dod10g2023 693 PANTHER SULFATE TRANSPORTER 645 693 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod10g2023 693 PANTHER SULFATE TRANSPORTER 24 616 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod10g2023 693 Gene3D STAS domain 511 687 IPR036513 -
Dod10g2023 693 TIGRFAM sulP: sulfate permease 87 617 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod10g2023 693 ProSiteProfiles STAS domain profile. 531 685 IPR002645 -
Dod10g2023 693 CDD STAS_SulP_like_sulfate_transporter 532 678 - -
Dod10g2023 693 PANTHER SLC26A/SULP TRANSPORTER-RELATED 645 693 - -
Dod10g2023 693 PANTHER SLC26A/SULP TRANSPORTER-RELATED 24 616 - -
Dod10g2023 693 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
Dod10g2023 693 SUPERFAMILY SpoIIaa-like 536 616 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2023 Dod-Chr10 41963527 41968280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2023 28 693 Inorganic Solute Cotransporters AT3G15990 73.077 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2023 K17471 - gmx:100812617 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2023 10 41963527 41968280 Dod10g2023 10 41963527 41968280 ECH
Dod10g2023 10 41963527 41968280 Dod06g2554 06 54723523 54730552 PCT