Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2022 ATGGGTATCAACAGCAACAACAGAGTGGAGCCTTTTGGTTGCATTGATGAACATGAGAACCACCATGACCATCTCCATGAGCATGATGAAAACATTCCAACCATCAAACTCCAAATCGAACAAGAGGAGATTATACCAATGGAAATCCACAGAGTTTGTTTGCCACCAGAGAGGACCACACTCCAGAAACTCACGCGGAGGCTCTCTGATATCTTCTTCCCGGATGCCCCATTCTCCGGTTTCAAGAACCAGACATTGTTAAGGAAGTTGCTTCTCGCTCTTCAGTACTTGTTCCCCATTTTGCAGTGGGCCCCTCACTACAACCGTCCCCTTCTCCTCTCTGACGCCATCGCTGGCCTCACCATTGCCAGCCTCGCCATTCCTCAGGGAATCAGTTACGCGAAGCTTGCAAACTTGCCACCTATTATTGGATTATATTCGAGCTTTGTGCCGCCGTTGATATACTCCCTGCTCGGAAGTTCTAGACATCTTGCTGTTGGGCCAGTTTCAATTGCGTCTTTGGTTATGGGATCAATGCTAAGTGAGCAGGTTTCTTTCACTGAACATCCAACCCTCTATCTGAAGTTGGCTTTCACAGCCACCTTCTTCGCTGGTTTATTCCAAGCTTCTCTTGGTCTATTAAGGTTAGGCTTTATAATTGATTTTCTGTCAAAGGCAACGCTGTTGGGTTTCATGGCGGGTGCAGCGGTCATAGTATCACTGCAGCAGCTTAAAGGGTTACTTGGAATAATGCACTTTACCAGCAAGATGCAAATAGTCCCTGTACTCATCTCTGTTTTCGATCACAGAGACGAGTGGTCATGGAAAACCATTGTCCTGGGATTCACCTTCCTTGCTTTCCTGCTGACAACAAGACAAATTAGCTTGAAGAAACCAAAACTATTCTGGGTTTCAGCAGCAGCCCCGTTGACATCAGTTATTTTGTCCACCATTTTGGTCTGTCTTCTGGGAAACATGGCTCATAAAATTGAAATTATCGGGGAATTGCCAAAGGGACTTAATCCACTATCAATAAACATGATGTACTTCAACGGTCCTTTCTTAGCTCTTGCTGTCAAAACTGGCATTGTCACAGGGATCCTATCTCTCACAGAAGGAATTGCCGTAGGTAGAACATTTGCATCCCTTAAGAGCTACCAGGTGGACGGAAACAAAGAAATGATGGCTATGGGTATTATGAACCTAGTTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCTCGATCAGCTGTTAGCTGTAATGCTGGAGCACAGACAGCAGTTTCAAACATGGTCATGGCTGCAGCTGTTTTGGTGGCCCTTCTGTTTCTCATGCCTCTGTTCTACTATACACCAACTTTTGTTCTAGCAGCCATTATCATCTCAGCTGTGATTGGGCTAATAGATTATCGAGCTGCATATAAATTGTGGAAAGTTGACAAACTTGATTTCTTGACCTGTTTCTGCTCCTTTATTGGGGTTTTATTCATTTCAGTGCCAATAGGCCTTAGTATAGCGGTTGCTATATCAGTCTTCAAGATACTGCTTCATGTCTATCGACCAAAAACTTCGGTTTTGGGGAATATTCCAGGAACACAAATATTCCACAACCTAGACCAATACAAAGAAGCTATAAGGGTTCCTTCATTTCTCATTCTGGCTGTTGAGTCTCCAATCTATTTTGCTAATTCAATTTACCTTCAAGAAAGGGTACTGAGATATGTTCGTAAAGAGGAAGAGCGCATAGAAGCAAATAAAGGAAGTTCATTGGAGTGCATAATCTTAGAGATGACAGCTGTCACCTCCATAGACACAAGTGGGCTTGACACTTTGTGTGAACTTAGAAAAGTGTTGGAGAAAAGATCACTTCAGTTTGTGTTGGCAAATCCTGTTGGAACTGTGCTGGAAAAGCTACATTTGTCAAAAATTTTGGATTCCTTTGGATCGAAAGGTGTCTATCTCACAGTGGAAGAAGCTGTGGCTGACATTTCATCATCCTGGAAAACTCATCCTTAA 2025 0.4341 MGINSNNRVEPFGCIDEHENHHDHLHEHDENIPTIKLQIEQEEIIPMEIHRVCLPPERTTLQKLTRRLSDIFFPDAPFSGFKNQTLLRKLLLALQYLFPILQWAPHYNRPLLLSDAIAGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLAVGPVSIASLVMGSMLSEQVSFTEHPTLYLKLAFTATFFAGLFQASLGLLRLGFIIDFLSKATLLGFMAGAAVIVSLQQLKGLLGIMHFTSKMQIVPVLISVFDHRDEWSWKTIVLGFTFLAFLLTTRQISLKKPKLFWVSAAAPLTSVILSTILVCLLGNMAHKIEIIGELPKGLNPLSINMMYFNGPFLALAVKTGIVTGILSLTEGIAVGRTFASLKSYQVDGNKEMMAMGIMNLVGSCSSCYVTTGSFSRSAVSCNAGAQTAVSNMVMAAAVLVALLFLMPLFYYTPTFVLAAIIISAVIGLIDYRAAYKLWKVDKLDFLTCFCSFIGVLFISVPIGLSIAVAISVFKILLHVYRPKTSVLGNIPGTQIFHNLDQYKEAIRVPSFLILAVESPIYFANSIYLQERVLRYVRKEEERIEANKGSSLECIILEMTAVTSIDTSGLDTLCELRKVLEKRSLQFVLANPVGTVLEKLHLSKILDSFGSKGVYLTVEEAVADISSSWKTHP* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2022 674 PANTHER SULFATE TRANSPORTER 37 674 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod10g2022 674 Pfam STAS domain 544 662 IPR002645 -
Dod10g2022 674 ProSiteProfiles STAS domain profile. 543 666 IPR002645 -
Dod10g2022 674 TIGRFAM sulP: sulfate permease 99 662 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod10g2022 674 Gene3D STAS domain 523 668 IPR036513 -
Dod10g2022 674 SUPERFAMILY SpoIIaa-like 549 665 IPR036513 -
Dod10g2022 674 Pfam Sulfate permease family 112 491 IPR011547 GO:0016021
Dod10g2022 674 PANTHER SLC26A/SULP TRANSPORTER-RELATED 37 674 - -
Dod10g2022 674 ProSitePatterns SLC26A transporters signature. 141 162 IPR018045 GO:0008271|GO:0008272
Dod10g2022 674 CDD STAS_SulP_like_sulfate_transporter 544 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2022 Dod-Chr10 41957584 41962039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2022 47 673 Inorganic Solute Cotransporters AT3G15990 73.206 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2022 K17471 - gmx:100817604 986.097