Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2015 ATGCCAAAGAAGGTTCAGAAAACTCTTCAAGATTACCTGTCAAGGGTGAAAAGCCCTCGCCACCCACAAATCCAATCAGCCTTCAACTCATTATCATCCTCCAAGAGCTGGTTTCTCTCTGCTTGCAAGCACCCTAAGACACCTTCTTTTGCCTTTGACGAATCTCACGGTGGTTGCAGCAACAAAAGCCACAACAACAACAACGACAAGAAGGACAGCGATGCAGCCACGCTGGCAGACATAGATCGTTTCCTCTACGAAAACTTCAAGTCTCTGTACTTCAGAGACGATGATGAAGAACAAGTAGAAACCGGAAACAGTAACAACACCAACACCAAAAGGGTCTCACTCTCATCGGAAGAGATCCAATTCCAAAACGAACAAGAGGCTCCGAAACTACTGGGCCCCACCTCACCGAGGTTGTTGGAACCGCCACGTGACCTTAGTGGATCGACAAGTTTCTTCGTGAAGCCGGTTCTGTCGGGGTCATCATTGCTTGCTGCTGAGGATGCTGCTACATCAAGCCCAACCTCAACCATAACAAACAACACCGATTCAGCTTCGAATAATTCAAATGACCATCATCATACCCTCCCTGATAACTGCATTGCTCTATTGACAAGCACTTCGAGCCCGTACGAGGATTTTAAGCGTTCCATGCAGGATGTGGTGGAAGCAAGGTGCAAAAACCGTGAAAGGGTCATTGATTGGGAATTTATGGAGGAGCTTTTGTTTTGTTACCTTAACCTTAATGAGAAGAAGTCTCACAAGTTCATTCTCAATGCCTTCGTGGATGTCGTCGCCGCCATGCGTCGGAATTCGGAGACGGCGGTTCCGGGGAAGCCACGGAGCGTTAGAACTGTTAGGATTGGTCGGTAG 879 0.479 MPKKVQKTLQDYLSRVKSPRHPQIQSAFNSLSSSKSWFLSACKHPKTPSFAFDESHGGCSNKSHNNNNDKKDSDAATLADIDRFLYENFKSLYFRDDDEEQVETGNSNNTNTKRVSLSSEEIQFQNEQEAPKLLGPTSPRLLEPPRDLSGSTSFFVKPVLSGSSLLAAEDAATSSPTSTITNNTDSASNNSNDHHHTLPDNCIALLTSTSSPYEDFKRSMQDVVEARCKNRERVIDWEFMEELLFCYLNLNEKKSHKFILNAFVDVVAAMRRNSETAVPGKPRSVRTVRIGR* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2015 292 Pfam Transcriptional repressor, ovate 210 269 IPR006458 -
Dod10g2015 292 MobiDBLite consensus disorder prediction 51 74 - -
Dod10g2015 292 ProSiteProfiles OVATE domain profile. 205 269 IPR006458 -
Dod10g2015 292 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 279 - -
Dod10g2015 292 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 204 270 IPR006458 -
Dod10g2015 292 MobiDBLite consensus disorder prediction 173 195 - -
Dod10g2015 292 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 279 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2015 Dod-Chr10 41891594 41892750 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod10g2015 Ovate 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2015 - - adu:107459577 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2015 10 41891594 41892750 Dod10g2015 10 41891594 41892750 ECH
Dod10g2015 10 41891594 41892750 Dod06g2562 06 54789515 54790414 PCT