Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2007 ATGGATTTTTGGCCAGAATTTCTTGCGAGCAGTTGGGGTAAAGAGTTTGTAGCGGGAGGCTTTGGTGGCACTGCTGGTATACTCTCTGGTTACCCTTTGGACACACTACGCATCATGCAGCAGAGTTCAGGTAGATCCGGCACTGCTTTCACCATCCTCAGAAATGTCGTGGCCAAGCAAGGACCAGCTGCACTCTACCGTGGCATGGCTGCACCTTTGGCCTCCGTTACTTTTCAGAACGCTATGGTTTTCCAAATATATGCAGTACTTTCAAGGGCATTTAGCTCATCCACTGTTTCAGCTAACGACCCTCCTTCCTTCAAGGGTATTGCTTTAGGAGGAGTTGGTACCGGTGCTCTACAAAGCATATTGCTTTCCCCTGTTGAGTTGGTTAAAATTCACCTTCAGCTGCACAACACAAGCCAATTGTCTGAATCCCAAAAGGGTCCCATAAGGGTCGCCAAGAACATATGGAGAAAGGAAGGTCTTCGTGGAATTTATAGAGGACTTGGCATCACTGTGCTCAGAGATGCACCTGCACATGGTTTCTACTTCTGGACATATGAGTACACGAGGGAACTCCTTCACCCAGGTTGCAGAAAAAGTTGTGAAGAAAGCTTGAATACTATGTTGGTAGCAGGAGGATTAGCAGGTGTAGCAAGCTGGGTTTTGAGCTACCCTTTAGATGTTATAAAGACAAGACTCCAGGCCCAAACACCTTGTTCACTGAAATACAAGGGCATTTTAGATTGCCTCAGAAAGAGCATCAAAGAAGAAGGGTACGTTGTGCTATGGAGGGGTTTAGGGACAGCGGTTGCTAGAGCCTTTGTAGTGAATGGTGCTGTATTTTCTGCTTATGAGATTACTTTGAGATGCTTGTTTAATAATTGA 891 0.459 MDFWPEFLASSWGKEFVAGGFGGTAGILSGYPLDTLRIMQQSSGRSGTAFTILRNVVAKQGPAALYRGMAAPLASVTFQNAMVFQIYAVLSRAFSSSTVSANDPPSFKGIALGGVGTGALQSILLSPVELVKIHLQLHNTSQLSESQKGPIRVAKNIWRKEGLRGIYRGLGITVLRDAPAHGFYFWTYEYTRELLHPGCRKSCEESLNTMLVAGGLAGVASWVLSYPLDVIKTRLQAQTPCSLKYKGILDCLRKSIKEEGYVVLWRGLGTAVARAFVVNGAVFSAYEITLRCLFNN* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2007 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 205 292 IPR018108 -
Dod10g2007 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 93 IPR018108 -
Dod10g2007 296 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 295 - -
Dod10g2007 296 SUPERFAMILY Mitochondrial carrier 11 287 IPR023395 -
Dod10g2007 296 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Dod10g2007 296 PRINTS Mitochondrial carrier protein signature 214 236 IPR002067 GO:0055085
Dod10g2007 296 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Dod10g2007 296 PRINTS Mitochondrial carrier protein signature 167 185 IPR002067 GO:0055085
Dod10g2007 296 Pfam Mitochondrial carrier protein 11 96 IPR018108 -
Dod10g2007 296 Pfam Mitochondrial carrier protein 112 196 IPR018108 -
Dod10g2007 296 Pfam Mitochondrial carrier protein 210 295 IPR018108 -
Dod10g2007 296 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 295 - -
Dod10g2007 296 Gene3D Mitochondrial carrier domain 13 295 IPR023395 -
Dod10g2007 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 194 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2007 Dod-Chr10 41818610 41820984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2007 1 296 Antiporters AT1G79900 71.284 7.29e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2007 K15109 - gmx:100812034 503.056