Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1993 ATGGGCGCGGACATGTCTAACAACCCACTTCCCTCTCACGCCAAGGACTTCTTTGCCTCCCCAGCTCTCTCCCTTAGCCTTGCTGGCATATTCCGGCATGCTGGGGTGGAGGCGGAGGGCGAGGCGGCGACTTCTAACATGGAGGTGGAGGAGGGGGAGGAGGGCAGCGGCGGCGGCCGGCGAGAAGACACGGTGGAGATTAGCAGCGAGAACTCGGGTCCCACAAGATCGAGATCAGAGGATGATTTTGAAGGAGAAGGTGAACATGATGATGATGATGATGGTGATGGGGATAATAAGAACAAGAAGAAGAAGAGGAAGAAATATCACAGGCACACCGCTGAGCAGATCAGAGAGATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAATTAGGCCTTGCTCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCATGAAAATTCTTTGCTGAAGACAGAAATAGAGAAACTAAAGGAGAAAAATAAGGCCTTAAGAGAGACCATAAACAAATCTTGTTGCCCCAACTGTGGCGTGGCCACAACTAGCAAAGATGGTGCCATGCCAACTGAAGAACAACAACTACGCATTGAAAATGCAAAACTCAGAGCTGAGGTAGAAAAGCTCCGAGCTGCTTTAGGGAAATATGGACCAGGGTCAACGTCCCCATCATGTTCATCCGGCCATGACCAAGAGAACAGAAGCTCTTTGGATTTTTACACAGGGATTTTTGGACTTGACAAAGCAAGGATAATGGAGATTGTAAACCAGGCAATGGAGGAACTCATGAAGATGGCTACAACGGGGGAACCCTTATGGCTCCGTAGTGTTGAGACTGGCCGCGAGATACTCAACTATGATGAGTACATGAAGGAGTTCGCTGTTGAGAATTCAAGCAGTGCCGCAAGGCCAAAGATATCCATTGAGGCCTCAAGAGACACTGGGGTTGTCTTTGTTGATCTCCCACGCCTTGTCCAAACTTTCCTAGATGCGAATCAATGGAAGGAAATGTTTCCATGTTTAATATCTAAGGCGGCAGCTGTGGATGTTATAAGCAATGGAGAAGCTTCTAACAGGAATGGTGCCGTTCAACTGATGTTTGCTGAGCTGCAAATGCTCACCCCAATGGTGCCCACGAGAGAGGTGTATTTTGTCCGGTTCTGCAAACAATTGAGTGCTGAACAATGGGCTATCGTTGATGTGTCCATTGATAAAGTAGAAGACAACATTGACGCATCCCTCGTGAAATGCAGAAAACGCCCATCCGGTTGCATTATCGAGGACAAGTCAAACGGCCATTGCAAGGTAATATGGGTGGAGCACTTGGAATGCCAGAAAAGCCCAGTCCATACAATGTTTCGCACCATTGTGAACAGTGGTCTGGCCTTTGGGGCAAGGCACTGGATTGCCACACTCCAACTTCAATGCGAGCGTCTAGTTTTCTTCATGGCAACAAATGTTCCCATGAAGGATTCAACCGGTGTTGCTACATTGGCTGGGAGGAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGCCATGCAATAGGCGCATCAAGCTTCCATACATGGACTAAGGTTACAAGTAAAACTGGGGAAGACATTAGGATTAGTTCAAGAAAGAACTTGAACGATCCCGGTGAACCTCTTGGAGTGATACTCTGTGCAGTTTCTTCTGCATGGTTACCCGTCACTCCTAATGTCTTGTTTGATTTCTTGAGGGATGAAACTCGCCGGACAGAGTGGGATATCATGTCCAGTGGTGGCTCAGTGCAGTCCATTGCAAATTTAGCCAAAGGACAAGACCGAGGCAATGCTGTAACCATCCAAACAATTAAATCGAATGAAAATAGTATGTGGGTATTGCAAGATTGCTGCACAAATGCTTATGAGTCAATGGTGGTATATGCTCCTGTGGACATCACTGGAATTCAGTCAGTGATGACAGGATGTGATTCAAGCAATCTTGCCATACTTCCCTCAGGATTCTCAATTGTTCCTGATGGACTCGAATCAAGGCCATTGGTGATTACTTCAAGGCAGGAAGAAAAAAACACAGAGGGAGGATCCTTGTTTACCATAGCATTCCAGGTCCTGACCAATGCTTCTCCAACAGCCAAGTTAACTATGGAGTCTGTGGACTCGGTCAACACTCTTGTATCTTGTACATTGAGAAATATCAGAACAAGTTTACAATGCGAAGATGGTTAG 2283 0.4661 MGADMSNNPLPSHAKDFFASPALSLSLAGIFRHAGVEAEGEAATSNMEVEEGEEGSGGGRREDTVEISSENSGPTRSRSEDDFEGEGEHDDDDDGDGDNKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLKEKNKALRETINKSCCPNCGVATTSKDGAMPTEEQQLRIENAKLRAEVEKLRAALGKYGPGSTSPSCSSGHDQENRSSLDFYTGIFGLDKARIMEIVNQAMEELMKMATTGEPLWLRSVETGREILNYDEYMKEFAVENSSSAARPKISIEASRDTGVVFVDLPRLVQTFLDANQWKEMFPCLISKAAAVDVISNGEASNRNGAVQLMFAELQMLTPMVPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSPVHTMFRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCHAIGASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGVILCAVSSAWLPVTPNVLFDFLRDETRRTEWDIMSSGGSVQSIANLAKGQDRGNAVTIQTIKSNENSMWVLQDCCTNAYESMVVYAPVDITGIQSVMTGCDSSNLAILPSGFSIVPDGLESRPLVITSRQEEKNTEGGSLFTIAFQVLTNASPTAKLTMESVDSVNTLVSCTLRNIRTSLQCEDG* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1993 760 ProSiteProfiles START domain profile. 265 502 IPR002913 GO:0008289
Dod10g1993 760 SUPERFAMILY Homeodomain-like 94 164 IPR009057 -
Dod10g1993 760 SMART START_1 274 499 IPR002913 GO:0008289
Dod10g1993 760 SUPERFAMILY Bet v1-like 267 499 - -
Dod10g1993 760 Coils Coil 162 192 - -
Dod10g1993 760 MobiDBLite consensus disorder prediction 38 114 - -
Dod10g1993 760 MobiDBLite consensus disorder prediction 53 67 - -
Dod10g1993 760 Gene3D - 93 176 - -
Dod10g1993 760 SMART HOX_1 105 167 IPR001356 GO:0003677
Dod10g1993 760 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 16 757 IPR042160 -
Dod10g1993 760 ProSiteProfiles 'Homeobox' domain profile. 103 163 IPR001356 GO:0003677
Dod10g1993 760 SUPERFAMILY Bet v1-like 529 745 - -
Dod10g1993 760 CDD homeodomain 110 161 IPR001356 GO:0003677
Dod10g1993 760 CDD START_ArGLABRA2_like 269 498 - -
Dod10g1993 760 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 16 757 - -
Dod10g1993 760 ProSitePatterns 'Homeobox' domain signature. 138 161 IPR017970 GO:0000981|GO:0006355
Dod10g1993 760 Gene3D - 274 497 IPR023393 -
Dod10g1993 760 Coils Coil 213 233 - -
Dod10g1993 760 Pfam Homeodomain 106 161 IPR001356 GO:0003677
Dod10g1993 760 Pfam START domain 275 499 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1993 Dod-Chr10 41743264 41749805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1993 67 759 Homeobox Transcription Factor Family AT1G79840 67.141 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod10g1993 START 3.2e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1993 K09338 - gmx:100808292 1288.86