Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1985 ATGATGGCAGGGAACCCTAACTGGTGGAGCATGCATCCACCTCTTATCCCTCCCCAATATGTCCTTGGATCTTCTTCAATTCCTTTTAATTCTTTGACAGAAAATCAAGAGCCCCCCCAGTCATGGAGCCAACTTCTTTTCACTGGATTACCAGGGGAAGAAGAGAGGCTGGGTTTCAGTCATTTTCAACCTAAGAAGTTGGAAAACTGGGATGAACAGTTTCTTGATCCGTCATCCAGAGTTCCTGCTATTGATGTGATAAAGCAAGAAGTTCCCCAAAGTGGCAACTTGTACGGCAATGGGCGTGAGGAATTTCTTCAGGCTTCTGGATCATCTTGGTCATCTCATATGGTGCCAGTTTCTTCCCCTAGGTCATGTGTCACTAGCTTGAGTAGTAATAATATATTGGATTTCACTTATAACAAGCCAGATCATAGGAAGAATCAACTGCCAGATCAAACATCTGAGTGTAATAGCACAACCAGCAGTACCGTTGGTGTTTCTAAGAAGGCTAGGGTTCAGCCATCTTCATCAAGCCAGCCACATCTGAAGGTGCGGAAGGAGAAGCTAGGTGATAGAATAACAGCACTTCACCAGCTAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTGGAAGCCATTGGATATATCAGATTCCTGCAGGGTCAAATTGAGGCACTAAGCTCTCCTTACTTGGATAGTGCATCAAAAAACAAGAGGAATCAACAGTCAGTACATGGAGAAGGGAATTCTGTATTTCCTGAGGACCCGGGTCAGCTGTTGAATGACAATAGCCTAAAAAGAAAGGGAGCTCCGAACCAGCAGGATATAGAAGATAAGCCAAAGGACCTGAAGAGTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGCACCCAACATGTTGGAAGCGAAAATGGTGCTGATTACTGGGCACCTGCATTTGGAAGTGGATTTTAA 963 0.4476 MMAGNPNWWSMHPPLIPPQYVLGSSSIPFNSLTENQEPPQSWSQLLFTGLPGEEERLGFSHFQPKKLENWDEQFLDPSSRVPAIDVIKQEVPQSGNLYGNGREEFLQASGSSWSSHMVPVSSPRSCVTSLSSNNILDFTYNKPDHRKNQLPDQTSECNSTTSSTVGVSKKARVQPSSSSQPHLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLDSASKNKRNQQSVHGEGNSVFPEDPGQLLNDNSLKRKGAPNQQDIEDKPKDLKSRGLCLVPVSCTQHVGSENGADYWAPAFGSGF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1985 320 MobiDBLite consensus disorder prediction 237 285 - -
Dod10g1985 320 PANTHER OS05G0228400 PROTEIN 18 307 - -
Dod10g1985 320 MobiDBLite consensus disorder prediction 237 252 - -
Dod10g1985 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
Dod10g1985 320 MobiDBLite consensus disorder prediction 143 183 - -
Dod10g1985 320 CDD bHLH_AtbHLH_like 184 231 IPR045239 -
Dod10g1985 320 Gene3D - 184 248 IPR036638 GO:0046983
Dod10g1985 320 MobiDBLite consensus disorder prediction 152 181 - -
Dod10g1985 320 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 307 - -
Dod10g1985 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 234 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1985 Dod-Chr10 41655644 41659833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1985 1 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 39.017 2.33e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1985 - - gmx:100802121 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1985 10 41655644 41659833 Dod10g1985 10 41655644 41659833 ECH