Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1983 ATGTCTGCAACATTGGAACATGATTACATAGGCTTGGCAGAGAATCCGTTAATGGACGGAAGCTCTGACAAGTTGTCTTCCTCTGAGGATGGTAAGTCCAAGTCCTCTTCTCTCAACTTCAAGGAAACTGAACTGAGGCTTGGCCTGCCAGGTTCTGAGTTTCCTGGGAGAAAATCATCAGGACCTGCTGGTGGGGTGTCCCTCTTTGGGAAGGACTTGCAGCACAACAAGCATTTTGCTTTGAAGAACCTTGTGGCTGGCGCTAAGAGGGGCTTCTCTGATGCCATTGATGCCTCAACTGGGAAATGGGGTCTCTCTGTCACTGATGGATCTGAGGTTGAGTTGGGAAAAGGTGCTGCTTTGTTCTCCCCCAGAGGTGGGAATGTTGTGAAGCCCCTTGTTGCCTTGGAGCCTAAAACTGCCACTCAACAGGCTAATAATACCACTGCAGTTGCACAGAACATCAAAGAGGGTGGTATGGTTCCTCAATCTGCCAAGCCAGCTCAGGAAAAGAAGCCTCAGGTTGCTGGAGCAGGTGACCATGGTACTGCTCCTGCTGCAAAGGCACAGGTTGTGGGGTGGCCACCAATTCGATCTTTCAGAAAGAACTCGATGGCCTCTAATTTGACAAAGAACAATGATGAAGCTGAAGGGAAACCAGGATTTGGTTGTCTCTATGTTAAGGTCAGCATGGATGGTGCCCCTTATCTCAGAAAGGTTGATCTGAAAACCTACAACAACTATAAGGAACTTTCTTCAGCTCTTGAGAAGATGTTCAGCTGCTTTACCATTGGTCAATGCAACTCTCCTGGACTTCCTGGGAAAGATGGGCTAAGTGAGAGCTCTTTGAGGGATCTTCTGCATGGCTCTGAATATGTTCTTACATATGAAGATAAGGATGGAGATTGGATGCTTGTCGGTGATGTTCCTTGGGAGATGTTCACCGACTCATGTAGGAGACTAAGGATCATGAAAGGCTCTGAGGCAATTGGACTAGGTACGTCTTACTCTTATTCTAAGCATGCATTTACCACTGTTTTTATATGGATCACTGTTTTTTATATTGGAATTGGAATGCAAGATTGCTTAAAAATGTGTGCCAATTATGTCTGTTCCAGCTCCAAGGGCAGTGGAAAAATCTAG 1143 0.4619 MSATLEHDYIGLAENPLMDGSSDKLSSSEDGKSKSSSLNFKETELRLGLPGSEFPGRKSSGPAGGVSLFGKDLQHNKHFALKNLVAGAKRGFSDAIDASTGKWGLSVTDGSEVELGKGAALFSPRGGNVVKPLVALEPKTATQQANNTTAVAQNIKEGGMVPQSAKPAQEKKPQVAGAGDHGTAPAAKAQVVGWPPIRSFRKNSMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYLRKVDLKTYNNYKELSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLGTSYSYSKHAFTTVFIWITVFYIGIGMQDCLKMCANYVCSSSKGSGKI* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1983 380 MobiDBLite consensus disorder prediction 160 188 - -
Dod10g1983 380 Pfam AUX/IAA family 42 333 IPR033389 -
Dod10g1983 380 SUPERFAMILY CAD & PB1 domains 224 325 - -
Dod10g1983 380 Gene3D - 221 338 - -
Dod10g1983 380 MobiDBLite consensus disorder prediction 25 39 - -
Dod10g1983 380 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 336 IPR003311 GO:0005634|GO:0006355
Dod10g1983 380 PANTHER AUXIN-RESPONSIVE PROTEIN 5 336 - -
Dod10g1983 380 MobiDBLite consensus disorder prediction 14 60 - -
Dod10g1983 380 ProSiteProfiles PB1 domain profile. 224 326 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1983 Dod-Chr10 41630665 41633859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1983 146 329 B3 DNA Binding Superfamily AT4G23980 23.585 9.03e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dod10g1983 AUX_IAA 2.8e-89 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1983 K14484 - jre:109000692 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1983 10 41630665 41633859 Dod10g1983 10 41630665 41633859 ECH