Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1964 ATGTCAATGTCCTGCAAGGATGGTAAACAACAGCAAGGATTGGACAACGGGAAGTATGTCCGGTACACACCTGAGCAGGTTGAGGCACTCGAGCGGCTCTATCATGACTGCCCCAAACCCAGCTCTATTCGCCGCCAGCAGCTCATCCGCGAGTGCCCTATCCTCTCCAACATTGAGCCAAAACAAATCAAAGTTTGGTTCCAGAACCGAAGATGCAGAGAGAAGCAGAGGAAAGAGGCTTTGCGCCTTCAGGCTGTGAATAGGAAACTGACAGCCATGAACAAGCTGCTGATGGAGGAGAATGATAGGTTGCAGAAGCAGGTCTCTCAATTGGTGTATGAAAATGGATACTTTCGTCAACATACCCAAAATACTACGCTGCCGACCAAAGACACGAGCTGTGAATCAGCGGTGACTAGTGGTCAACGCAGCTTGACAAACCAGCAGCATCCCCCAAGGGATGCAAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAGACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTAGCTATTTCTCATGGTTGCACTGGTGTGGCAGCAAGAGCCTGTGGCCTAGTGGGTTTAGAACCCACAAGGGTTGCAGAGCTCCTCAAAGATCGGCCTTCTTGGTTCCGTGATTGCCGAGCTGTTGATGTTCTGAATGTGCTGCCCACAGCTAATGGTGGAACCATTGAGCTGCTTTATATGCAGCTATATGCGCCAACCACATTGGCACCTGCTCGGGACTTCTGGTTGTTGCGCTACACATCTGTTTTAGAAGATGGAAGCCTAGTGATCTGTGAGAGATCCCTTAAGAATACACAAAATGGTCCAAGCATGCCTCCCGTGCAGCATTTTGTTAGAGCAGAGATGCTGCCTAGTGGGTACCTGATAAGACCTTGTGAAGGAGGTGGTTCCATCATCCACATTGTTGATCACATGGATTTAGAGCCTTGGAGTGTTCCTGAAGTATTGCGTCCACTGTATGAATCATCAACGGTTTTGGCTCAGAAGACAACGATGGCGGCCCTACGTCAGCTAAGGCAGATTTCGCATGAAGTGTCTCAGTCTAATGTAACTGGGTGGGGCAGACGACCAGCAGCTCTTCGAGCACTTGGCCAGAGACTGAGCAGGGGTTTCAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGTCAATGATTGGCAATGACGGAGTTGATGATGTTACTATTCTAGTGAATTCATCACCTGACAAGTTGATGGGCCTGAATCTTTCCTTTGCTAATGGATTTCCACCTGTCAGCAATGCTGTTTTATGCGCCAAAGCTTCAATGCTATTGCAGAATGTGCCTCCAGCCATTTTGCTAAGGTTCCTGCGGGAGCACAGGTCAGAATGGGCAGACAACAACATGGACGCTTACTCAGCTGCTGCCATTAAAGTTGGCCCTTGTAGCTTATCGGGATCTCGTGTTGGAAATTATGGGGGTCAAGTTATTCTTCCTCTAGCCCACACTATCGAGCATGAGGAGTTTCTGGAAGTCATTAAATTGGAAGGAATTGCTCATTCTCCTGAAGAAGCAATAATGCCCAGAGAAGTGTTTCTTTTGCAACTCTGTAGTGGAATGGATGAGAATGCTGTTGGCACCTGTGCTGAACTCATATTTGCTCCGATTGATGCATCCTTTGCTGATGATGCCCCCCTTCTACCTTCCGGATTTCGCATCATTCCTCTTGATTCTGGAAAGGAAGCATCCAACCCAAATCGCACCCTTGACCTTGCCTCTGCCCTTGACGTTGGCCCCACTGGAAACAGAGCATCAAATGATTATTCTGGAAATTCTGGCTCTATGAGATCTGTGATGACAATAGCATTTGAATTTGCATTCGAAAGTCATATGCAAGACCATGTGGCATCCATGGCACGCCAATATGTTCGCAGCATTATATCATCAGTCCAAAGGGTAGCTTTAGCGCTTTCGCCTTCTCATTTGAGTTCACAAGCTGGGCTTAGGACACCTTTGGGTACCCCTGAAGCACAAACTCTTGCTCGATGGATCTGCAACAGTTATAGGTGCTACTTGGGTGTTGAGCTACTCAAATCTAATAATGAGGGGAACGAATCTCTACTCAAGTCCTTGTGGCATCACTCAGATGCAATATTGTGCTGCACTCTTAAGGCATTGCCAGTGTTCACTTTTGCAAACCAGGCAGGGCTTGACATGCTGGAAACTACCTTAGTTGCACTACAAGATATAACTCTGGAGAAAATATTTGATGATCATGGCCGAAAGATTCTCTGCTCAGAGTTTCCCCAAATTATTCAACAGGGTTTTGCATGCCTTCAAGGTGGTATTTGTCTCTCAAGCATGGGGAGACCTATCTCGTATGAAAGAGTAGTGGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCATTGTATTTGCTTTATGTTCATGAACTGGTCTTTTGTTTGA 2523 0.4713 MSMSCKDGKQQQGLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEALRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLPTKDTSCESAVTSGQRSLTNQQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAELLKDRPSWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQISHEVSQSNVTGWGRRPAALRALGQRLSRGFNEALNGFTDEGWSMIGNDGVDDVTILVNSSPDKLMGLNLSFANGFPPVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGIAHSPEEAIMPREVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASNPNRTLDLASALDVGPTGNRASNDYSGNSGSMRSVMTIAFEFAFESHMQDHVASMARQYVRSIISSVQRVALALSPSHLSSQAGLRTPLGTPEAQTLARWICNSYRCYLGVELLKSNNEGNESLLKSLWHHSDAILCCTLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKILCSEFPQIIQQGFACLQGGICLSSMGRPISYERVVAWKVLNEEENAHCICFMFMNWSFV* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1964 840 Coils Coil 83 114 - -
Dod10g1964 840 MobiDBLite consensus disorder prediction 123 153 - -
Dod10g1964 840 CDD homeodomain 18 78 IPR001356 GO:0003677
Dod10g1964 840 SMART HOX_1 15 81 IPR001356 GO:0003677
Dod10g1964 840 SUPERFAMILY Homeodomain-like 17 80 IPR009057 -
Dod10g1964 840 Pfam MEKHLA domain 697 839 IPR013978 -
Dod10g1964 840 ProSiteProfiles START domain profile. 153 368 IPR002913 GO:0008289
Dod10g1964 840 CDD START_ArGLABRA2_like 157 372 - -
Dod10g1964 840 Gene3D - 197 378 IPR023393 -
Dod10g1964 840 SUPERFAMILY Bet v1-like 162 371 - -
Dod10g1964 840 CDD bZIP 70 109 - -
Dod10g1964 840 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 840 IPR044830 GO:0003700
Dod10g1964 840 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Dod10g1964 840 SMART START_1 162 372 IPR002913 GO:0008289
Dod10g1964 840 MobiDBLite consensus disorder prediction 123 157 - -
Dod10g1964 840 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Dod10g1964 840 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 840 - -
Dod10g1964 840 Pfam START domain 163 371 IPR002913 GO:0008289
Dod10g1964 840 Gene3D - 10 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1964 Dod-Chr10 41459010 41466657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1964 1 792 Homeobox Transcription Factor Family AT1G52150 86.524 0.0 1423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dod10g1964 START 1.5e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1964 K09338 - zju:107428556 1597.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1964 10 41459010 41466657 Dod10g1964 10 41459010 41466657 ECH