Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1953 ATGAAATGTACGGACACAACCAGCGTTTGCACTTCTTTCTTGGCCTTCAAGCCTCGACCAGACCAGACTTTACCTGTCATACAAAGCATGTTTGATGTGCTTCCCAGTGACATCACTTTTGAAGGCAATGGCTGGGGTTACATATTCATCAGGAAGAACTGTTCTTGTGCTGATGGTGTGAAGAACTACGTGTCTAACACCACGTTCTCTGTGAAATCCAATGAAGGGTTTGTGTATGACTTGGTGATGGATGCCTATGATGGTCTTGCCCTATTACCAAACACAAACCGCTGCGCAAGAAGGGGTGCTGTGATGTCACTGAGGTTGTTCTGCAGCTGCTCCCGTGGACCGTGGAACTATTTGGTGAGTTATGTCATCAGAGATGGTGATAGTGTTGAATCGTTGGCAAGCAGGTTTGGGGTTAGCATGGATAGCATTGAAGCTGTAAATGGCATTGAGAATCCTGATAATGTCACCGTTGGTTCTCTGTATTATATACCTCTTGATTCGGTTCCTGGAGAGCCTTATCTGTGGAAGAATGATACTCCTCCAGTTCCTATCCCTTCACCATCTGCTGATAATCTTTCAGCAGCTGATCAAGTCAATCAAAAGGCTCATGTGCCCTCTGGATGGATCATTGGGGGCTTAGGGGTTGGTCTTGCTCTGATAATGTTGAGCATTATTCTGTGTGTTTCTCTTACCCTAAGGTCGTCAGGGTGTATTGCTGAAGCCAGATGTCATTCAAAAGAAGTTGAGGGAAAAATCTCGCATAAATTCCATATTCATGGGAATCCATGTTTGTTTTGTGGTTCTGGAAGGCACATATCTGGCAAAACTAAAGACCAGAAGCAAGATGATGGTGAATCCAGCAATCACCAAATTACAGTTCCTGAAGCTTCAACTCTAGGTCCTGACGTATTTAACATGGATAAGCCTATAGTTTTCACATATGAAGAGATTTTTTCCTCAACTGATGGTTTCTCTGATTCAAATCTGCTTGGATGCAGAACATATTGTTCTGTTTACTATGGCCTCCTTCGTGACCAGGAAGTTGCTATTAAAAGAATGACAACTACAAAAACTAAAGACTTTATGTCAGAGTTGAAAGCTATGTGCAAGGTTCATCATGCTAATCTGGTAGAATTTATCGGCTATGCTGCCAGTCACGATGAGATTTTCCTAATTTATGAATATGCTCATAAGGGTTCACTCAGAAGCCATTTGCATGATCCACAAAATAAGGGTCATTCGTCACTTTCTTGGATCATGAGGGTCCAGATTGCGCTTGATGCTGCTAGGGGCCTTGAATATATACATGAGCATACAAAAACTCATTATGTCCATCAAGATGTCACCACAAGCAATATTTTACTCGATGCTTCCTTTAGAGCCAAGATATCGGATTTTGGGTTAGCAAAACTTGTAGCCAAAGGAAACAAGGGAGAAGCCACGACAACCAAAATTGTTACTGCATATGGATACCTTGCTCCAGAATACTTGAGAGATGGCCTTGCGACTGCCAAAAGCGATGTATATGCGTTTGGTGTTGTTCTTTTTGAGATCATATCAGGGAAGGAGGCCATTATTCAAACAGAAGGCTTGATGACAAAGAATCCTGAAAGACGTTCACTGACATCTATTATGATGTCCGTTCTTAGGAACTCACCTGATTCCATGAGCAGGTCAAGCATGAGAGACTACGTTGATCCTAATATGATGAATCTGAATCATCATGATAGTGTATTTAAGATGGCCATGCTGGCAAAACAATGTGTGGAGGACGACCCCATCTTACGACCTGATATGAAGCAAGTTGTGATTTCCCTCTCACAGATCCTCTTGTCTTCTGTTGAGTGGGAAGCGACTCTAGCTGGGAACAGCCAGGTATTCAGTGGGCTTATTCAAGGAAGATAG 1914 0.4269 MKCTDTTSVCTSFLAFKPRPDQTLPVIQSMFDVLPSDITFEGNGWGYIFIRKNCSCADGVKNYVSNTTFSVKSNEGFVYDLVMDAYDGLALLPNTNRCARRGAVMSLRLFCSCSRGPWNYLVSYVIRDGDSVESLASRFGVSMDSIEAVNGIENPDNVTVGSLYYIPLDSVPGEPYLWKNDTPPVPIPSPSADNLSAADQVNQKAHVPSGWIIGGLGVGLALIMLSIILCVSLTLRSSGCIAEARCHSKEVEGKISHKFHIHGNPCLFCGSGRHISGKTKDQKQDDGESSNHQITVPEASTLGPDVFNMDKPIVFTYEEIFSSTDGFSDSNLLGCRTYCSVYYGLLRDQEVAIKRMTTTKTKDFMSELKAMCKVHHANLVEFIGYAASHDEIFLIYEYAHKGSLRSHLHDPQNKGHSSLSWIMRVQIALDAARGLEYIHEHTKTHYVHQDVTTSNILLDASFRAKISDFGLAKLVAKGNKGEATTTKIVTAYGYLAPEYLRDGLATAKSDVYAFGVVLFEIISGKEAIIQTEGLMTKNPERRSLTSIMMSVLRNSPDSMSRSSMRDYVDPNMMNLNHHDSVFKMAMLAKQCVEDDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLIQGR* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1953 637 SUPERFAMILY Protein kinase-like (PK-like) 305 609 IPR011009 -
Dod10g1953 637 ProSitePatterns Tyrosine protein kinases specific active-site signature. 446 458 IPR008266 GO:0004672|GO:0006468
Dod10g1953 637 Gene3D Phosphorylase Kinase; domain 1 303 398 - -
Dod10g1953 637 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 637 IPR044812 GO:0019199|GO:0045087
Dod10g1953 637 ProSiteProfiles Protein kinase domain profile. 327 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1953 637 Pfam Protein tyrosine and serine/threonine kinase 332 607 IPR001245 GO:0004672|GO:0006468
Dod10g1953 637 SMART LysM_2 123 167 IPR018392 -
Dod10g1953 637 Gene3D Transferase(Phosphotransferase) domain 1 400 624 - -
Dod10g1953 637 Gene3D LysM domain 118 172 IPR036779 -
Dod10g1953 637 PANTHER BNAA06G02020D PROTEIN 1 637 - -
Dod10g1953 637 CDD LysM 122 166 IPR018392 -
Dod10g1953 637 Pfam LysM domain 124 161 IPR018392 -
Dod10g1953 637 ProSiteProfiles LysM domain profile. 122 166 IPR018392 -
Dod10g1953 637 SUPERFAMILY LysM domain 122 167 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1953 Dod-Chr10 41355226 41358948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1953 1 637 Receptor kinase-like Gene Family AT1G51940 62.654 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dod10g1953 PK_Tyr_Ser-Thr 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1953 - - gmx:100796989 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1953 10 41355226 41358948 Dod06g2638 06 56182904 56191444 PCT