Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1949 ATGGGCAAAGCTACCAGATGGTTGAAGGGGTTGTTGGGAATGAAGAAGGAGAAGGACCATTGTGGCAATTGGCGCTCATTGTCTCCTGACAAGAAGGAGAAGAAACGTAGGAGTTTCACAAAGTCAGGGAAGGATCATGAAGTGAATCACATTACTTCAACTGATGTTAGGAGGGCCTCTGAGTCTGATGATGCTAGGCTCAGATCCTATGTTGCTGAGCAAGAAAGTGAGCAGAACAAGCAAGCCATTGCTGTGGCCGCCGCAACCGCCGCAGTGGCTGATGCGGCCGTGGCCGCGGCACACGCTGCAATGGCAGTTGTGAGGCTAACAAGCCATGGCAGGGGTACATTGTTTAGTGGAAGCAGGGAGAGGTGGGCTGCAGTGAAGATCCAATCCTTTTTCAGAGGTTATTTGGCTCGGAAGGCTCTTAGAGCACTCAAAGGACTGGTTAAGATACAGGCTCTTGTTAGAGGGTACCTAGTTAGAAAAAGGGCTGCTGCAACTCTTCATAGTATGCAGGCTCTACTGAGAGCTCAGGTTGCCGTCCGATCACAGAGAGCCCGTCGTTCCATGAGCAAGGGGAGTAGATTTCAACCACAAACTCCTGCAAGAAAATATGCGCAATGGTTTGATGACACAAGAAGTGAATTCCACAGCAAAAGGCTACCAACATCTCATGAAACATCATTCAATATCAATGGATTTGATGAGAGCCCCAGAATTGTTGAAATCGACACTTATAGACCCCAATCAATGTCTAGGCGAATTACCACTACAGTTTCAGAAAGTGGAGAAGACCTGCATTACCAAGCAATCTCGGTTCTTGAATGCAGACATCCTCAACATTTGGAATGGTACTTGAATGCAGATGAATGCAAGTTCTCAACAGCTCACAGCACGCCTCGTTTGGCTAATGCCCCGGCTACACCCTTGAAGAGTGTTTGTGGAGACCCCTTTAGGCCTTACTGCAATTCCCCAAACTACATGGCCAATACTCAATCATACAAGGCAAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGGCCCGACCCCAAGAAGAGGATTTCCCTCAATGAAATAATGGCTGCAAGAAATAGCACAAGTCGTATTAGAATGCCATGGTCATCAAATCCAGAATGTCAAGAATGTTGCAGTTTTGACAAAGTTGGTTATCCAGGCACGCCCTATCAGCTGGAGAATCAAGAGGAAAATTTGAGACGACAATGA 1227 0.4703 MGKATRWLKGLLGMKKEKDHCGNWRSLSPDKKEKKRRSFTKSGKDHEVNHITSTDVRRASESDDARLRSYVAEQESEQNKQAIAVAAATAAVADAAVAAAHAAMAVVRLTSHGRGTLFSGSRERWAAVKIQSFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALLRAQVAVRSQRARRSMSKGSRFQPQTPARKYAQWFDDTRSEFHSKRLPTSHETSFNINGFDESPRIVEIDTYRPQSMSRRITTTVSESGEDLHYQAISVLECRHPQHLEWYLNADECKFSTAHSTPRLANAPATPLKSVCGDPFRPYCNSPNYMANTQSYKAKLRSHSAPKQRPDPKKRISLNEIMAARNSTSRIRMPWSSNPECQECCSFDKVGYPGTPYQLENQEENLRRQ* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1949 408 SMART iq_5 122 144 IPR000048 GO:0005515
Dod10g1949 408 SMART iq_5 145 166 IPR000048 GO:0005515
Dod10g1949 408 Pfam Protein of unknown function (DUF4005) 299 368 IPR025064 -
Dod10g1949 408 MobiDBLite consensus disorder prediction 19 60 - -
Dod10g1949 408 Pfam IQ calmodulin-binding motif 150 164 IPR000048 GO:0005515
Dod10g1949 408 Pfam IQ calmodulin-binding motif 124 144 IPR000048 GO:0005515
Dod10g1949 408 PANTHER IQ-DOMAIN 5-RELATED 1 378 - -
Dod10g1949 408 Gene3D - 65 148 - -
Dod10g1949 408 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Dod10g1949 408 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 378 - -
Dod10g1949 408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 165 IPR027417 -
Dod10g1949 408 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1949 Dod-Chr10 41296848 41298900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1949 1 372 IQD Protein Family AT3G16490 53.453 4.40e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1949 - - gmx:100797686 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1949 10 41296848 41298900 Dod10g1949 10 41296848 41298900 ECH
Dod10g1949 10 41296848 41298900 Dod06g2644 06 56408109 56412148 PCT