Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1933 ATGGCCACGGTACCGGGGCAGCTGATTTGGGAGATCGTGAAGAAGAACAACTCTTTCCTCGTGAAGGAGTTTGGAAGGGGCACTCAGAGCGTCCAGTTCAGCAGAGAGAGCAACAATCTCTACAACCTCAACTCTTTCAAATACTCTGGTTTGGCCAACAAGAAAAGTGTTACTATTCAGCCTGCTGGTAAAGATCAGTCTGTGTTGCTGGCAACAACCAAGACAAAGAAACAAAACAAGCCTTCTGCATTACTTCACAAATCTGTCATGAAGAAGGAGTTCCGTAGAATGGCAAAGGCTGTGCAAAATCAGGTGGCGAATAACTACTACAGGCCTGATCTCAAGAAGGCAGCTCTTGCAAGGTTGAGCGCTGTCAACAGGAGCCTCAAGGTTGCAAAGTCTGGTGTTAAGAAGAGAAACAGACAGCCTGTGAGGGTCCGTGGTAGGAAGTGA 453 0.4746 MATVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSRESNNLYNLNSFKYSGLANKKSVTIQPAGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFRRMAKAVQNQVANNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQPVRVRGRK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1933 150 MobiDBLite consensus disorder prediction 131 150 - -
Dod10g1933 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Dod10g1933 150 MobiDBLite consensus disorder prediction 132 150 - -
Dod10g1933 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Dod10g1933 150 Gene3D - 6 133 - -
Dod10g1933 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1933 Dod-Chr10 41146392 41148612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1933 1 142 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 73.944 9.76e-76 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1933 K02903 - gmx:100500189 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1933 10 41146392 41148612 Dod10g1933 10 41146392 41148612 ECH