Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1924 ATGAGTCGAGAACAGCAGAAGCGAGGGAAGCAAGAGAAAGGTTCAGATGGTGCTGAGAAGGTTATTGTTGCCGTCAAGGCATCAAAGGAAATTCCAAAGACTGCCCTTGTTTGGTCTCTGACTCATGTTGTTCAGCCTGGGGACTGCATTACGCTGCTTGTGGTTGTGCCTTCACAAAGTTCAGGCAGAAGATTGTGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCCAGCACTCACAAGAAGTCCCCTTCGGGAACTAGTTCAGAACAGAAGATTGACATCACTGATTCTTGCTCTCAGATGATCCTTCAGCTCCATGACGTCTATGATCCTAATAAGATAAATGTCAAGATTAAAATTGTTTCCGGATCACCCTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAGCACAAGCCAATTGGGTCGTATTAGACAAACAGCTCAAACATGAGGAAAAGCAGTGCATGGAAGAGCTGCAGTGCAACATCGTCATTATGAAGCGATCCCAACCAAAAGTGCTCCGCCTGAATTTGGTTGGATCACAAAAGAAGGATCTTGAAGAAGCAGCTCCATTACGTTCTGAGCAAGATGGGATGCCTGGAAAACAAACCAAGAAGAAGAATGATTCTTTAAATTCCATGAAAGGTCCAGTTGTCACCCCAACTAGCAGCCCTGAACTAGGGACACCATTTACTGCAACTGAAGCCGGTACTTCATCAGTTTCCAGCTCTGATCCTGGAACTTCACCATTCGTCATTTCTGAGATGAATGGTGAGTCAAAGAAAGAGGAAACTATCAAAGAAAATCAAGAACTCGGTGATACTAATTCAGATTCAGATAGTGAAAATTTGTCCACATCTTCAGCAAGCATGAGGTTCAAGCCATGGATCGTAGATTTACTTCTACATCAACGATCACCTCAATGCAGAGAGGACAGATCAGAAAGATCTCGTAGCAAGCCTCAGTCATCTACAGCTAGAGCTTTGCTGGAAAAGTTCTCAAGGCTGGATAGGGAAGCTGAAATTGACATCTCAAGCCATATGAATGGCTTGGATTTTAGCGGAAATGTAAGAGAAGCAATAGCGTTATCTAGAAATGCTCCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCTGTTTTTGGGAAACCACCAAAGTGGTTCAGCTATGCTGAGTTGGAGCTTGCTACCGGTGGATTCTCGCAAGCTAACTTCTTGGCTGAAGGGGGATTTGGCTCGGTTCACAGAGGGGTTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTACATATGTAATGGATCACTGGACACTCATTTATATGGGAGAAAATGGGAACCATTAGAATGGTCAGCACGGCAAAAAATTGCCGTTGGTGCTGCTCGAGGGTTGCGATATCTTCATGAGGAGTGCAGAGTAGGTTGCATTATCCACCGTGACATGCGGCCAAACAACATTCTTATCACGCATGATTTTGAACCATTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGGGACACAGGCGTGGAAACCAGAGTAATAGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGTCAAATAACTGAAAAGGCTGATGTTTATTCCTTTGGAGTGGTATTAGTAGAGCTTGTTACTGGCCGAAAAGCTGTGGATCTCAATAGGCCGAAGGGGCAGCAGTGTCTCACTGAATGGGCACGACCACTGTTAGAAGAATATGCCATTGAGGAACTGATTGATCCGAGGTTGGGAAGTCACTATGCAGAACATGAGGTCTATTGCATGCTTCATGCTGCATCATTATGCATAAGTCGAGATCCTTATTCTAGACCACGCATGTCACAGGTTCTCCGCATACTAGAGGGTGACATGGTCATGGACACAAGTTACATTTCAACTCCTGGTTACGATGTGGGAAACCGGCGTGGTTGA 2091 0.4529 MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASTHKKSPSGTSSEQKIDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKQCMEELQCNIVIMKRSQPKVLRLNLVGSQKKDLEEAAPLRSEQDGMPGKQTKKKNDSLNSMKGPVVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFVISEMNGESKKEETIKENQELGDTNSDSDSENLSTSSASMRFKPWIVDLLLHQRSPQCREDRSERSRSKPQSSTARALLEKFSRLDREAEIDISSHMNGLDFSGNVREAIALSRNAPPGPPPLCSICQHKAPVFGKPPKWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGRKWEPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRLGSHYAEHEVYCMLHAASLCISRDPYSRPRMSQVLRILEGDMVMDTSYISTPGYDVGNRRG* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1924 696 MobiDBLite consensus disorder prediction 204 254 - -
Dod10g1924 696 ProSiteProfiles Protein kinase domain profile. 403 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1924 696 MobiDBLite consensus disorder prediction 256 273 - -
Dod10g1924 696 Gene3D Transferase(Phosphotransferase) domain 1 479 684 - -
Dod10g1924 696 PANTHER OS01G0253100 PROTEIN 16 694 IPR045271 GO:0004714|GO:0006468
Dod10g1924 696 Pfam Protein tyrosine and serine/threonine kinase 407 672 IPR001245 GO:0004672|GO:0006468
Dod10g1924 696 CDD USP_Like 20 143 - -
Dod10g1924 696 MobiDBLite consensus disorder prediction 305 319 - -
Dod10g1924 696 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Dod10g1924 696 MobiDBLite consensus disorder prediction 305 325 - -
Dod10g1924 696 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 694 - -
Dod10g1924 696 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Dod10g1924 696 SUPERFAMILY Protein kinase-like (PK-like) 387 678 IPR011009 -
Dod10g1924 696 MobiDBLite consensus disorder prediction 185 287 - -
Dod10g1924 696 CDD STKc_IRAK 409 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1924 Dod-Chr10 40894821 40901107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1924 383 677 Trihelix Transcription Factor Family AT1G70460 53.311 4.47e-101 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dod10g1924 Pkinase 5.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1924 - - gmx:100789216 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1924 10 40894821 40901107 Dod10g1924 10 40894821 40901107 ECH
Dod10g1924 10 40894821 40901107 Dod06g2708 06 58122782 58129010 PCT