Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1921 ATGGTGGAGGAAAAGCCAACATTCCTCCATGGAACAATTGAAGCTACCATCTTTGATACCACCCCTTACTCTCCTTCATTTCCCTTCAATTGCCTATTTCCAAATGGAAGGCCTGCTTATGTGACCATCAAGATTGGCAACAAGAAGGTGGCGAAAACGACACAAGAAAGAGAGCGTGTTTGGAACCAAACCTTTCAGATTCATTGTGCTCATCCAACTGATTCAACTATCACAATTACACTGAAAACATCATGCTCCATATTGGGGAAATTCCGCATCCAGGCCCAGCAGTTGAAGGAAGGAAGTTTGATCCATGGTTTCTTCCCTCTCCTCATGGAAAATGGAAGACCAAACCCACAACTAAAACTAAGGTTTATATTATGGTTTAAGCCAGCAGATTTGGAAACAAGTTGGGCAAAGATAATAAGCAATGAGGAATTTAAAGGGCTGAGTGATGCTACATACCCACAAAGGTCCAATTGTCATGTTAAGCTCTATCATGATGCTCATCATTCACCTGCTTTCCAACCTCCTTTTGATCTATGTGGAGCCCCAAGGAAGCTATGGGAGGATGTCTACAAAGCCATTGAGGGTGCCAAGTATTTAATTTATATTGCAGGCTGGTCCTTTAACCCCAAGATGGTTCTGGTCAGAGATCCTCAAACAGAAATCCCACATGCTAGAGAAGTAAGGCTCGGTGAGCTATTAAAGAAGAAGGCAGGTGAAGGAGTGGCTGTGAGAGTTATGATTTGGGATGATGAGACATCTTTGCCTTTTATTAAGAGCAAAGGTGTGATGAACACCCATGATGAGGAGGCTTTTGCTTACTTCAATCACACAAAAGTAATATGCAGAAAGTGTCCCAGATTACACCATAAGCTCCCCACAGTCTTTGCTCACCATCAGAAGACCATAACTGTGGACACCAGAGCACTCAACTCTGCTAATGAAAGAGAAATTATGAGCTTTCTGGGTGGTTTAGATTTGTGTGATGGCCGGTATGACACAGAGCAACACACATTGTTTCAAACACTTACTGAGGAATCCCATTACCATGACTTCTACCAGACAAGCATTGCAGGAGCTAGCATCAACAAAGGAGGGCCAAGAGAGCCTTGGCATGATGCTCATGCTTGTGTTACTGGTGAGGCTGCATGGGATGTGTTAACCAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTCTTCTAGTCCCTGCTAACACCTTAGTAAATCTCCTTCCCTCTTTCTCAAGCACTCCCTTAGAGAGGGATTGGAAAGTTCAAGTTTATCGATCGATTGATCATGTATCTGCTAGCCAAATGTTTAGAAAGCTAACTGTGGAGAGAAGCATACATGAGGCTTATGTTGAAGCAATTAGGCATGCTGACAGGTTTATATACATTGAGAACCAATATTTCATTGGAGGGTGCCATTTGTGGGAGAAAGATAGGCATAGTGGGTGTGGAAATCTGATCCCCATTGAGATTGCACTCAAGGTGGTCAGCAAGATCAAAGCAAAAGAAAGGTTTGCAGTGTACATCGTAATACCAATGTGGCCAGAAGGAGTTCCTGAGAGTGAACCAGCTCAAGATATACTGCATTGGACCAGAGAAACAATGTCAATGATGTATAGGTTGATTGGGGAAGCAATACAAGAAAGTGGGGAACCGGGCCACCCAAGAGACTACTTGAATTTCTTCTGCCTTGCAAATAGGGAACAGAAGAGAACGGAGGAGTATCTTCCACCACATTCTCCCCATCCTGAAACACAATACTGGAATGCGCAGAAAAATAGGAGGTTCATGGTTTATGTTCACTCCAAGATCATAATAGTGGACGACCTATACATCTTAATAGGGTCAGCCAATGTGAACCAAAGATCCATGGACGGGCAAAGGGACACTGAGATTGCCATAGGGTGTTACCAGTCTCAAGTTGGAGCTGACAAACAAATAAGCCAAGGTGACATTCATGCATACAGAATGTCGCTGTGGTGTGAACACACATCTGGGACTGAGGAATTGTTCCTAAGGCCAGAAAGTTTGGAATGTGTGCATGGAATGCGCTCAATAGGAGATCAAATGTGGGAAGTGTATAGCAATGAAGAAATTGTGGACATGGAAGGTGTTCACCTTGTGACTTATCCTGTTAAGGTAACACAAGAAGGGTCTGTGGAGGACCTGCCTAATGGTGGGGATTATTTTCCTGACACAAAATGCCCAGTAAAAGGGAAGAGATCTAAATTGCTACCTCCTATCTTTACCACTTAA 2277 0.433 MVEEKPTFLHGTIEATIFDTTPYSPSFPFNCLFPNGRPAYVTIKIGNKKVAKTTQERERVWNQTFQIHCAHPTDSTITITLKTSCSILGKFRIQAQQLKEGSLIHGFFPLLMENGRPNPQLKLRFILWFKPADLETSWAKIISNEEFKGLSDATYPQRSNCHVKLYHDAHHSPAFQPPFDLCGAPRKLWEDVYKAIEGAKYLIYIAGWSFNPKMVLVRDPQTEIPHAREVRLGELLKKKAGEGVAVRVMIWDDETSLPFIKSKGVMNTHDEEAFAYFNHTKVICRKCPRLHHKLPTVFAHHQKTITVDTRALNSANEREIMSFLGGLDLCDGRYDTEQHTLFQTLTEESHYHDFYQTSIAGASINKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSLLVPANTLVNLLPSFSSTPLERDWKVQVYRSIDHVSASQMFRKLTVERSIHEAYVEAIRHADRFIYIENQYFIGGCHLWEKDRHSGCGNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGVPESEPAQDILHWTRETMSMMYRLIGEAIQESGEPGHPRDYLNFFCLANREQKRTEEYLPPHSPHPETQYWNAQKNRRFMVYVHSKIIIVDDLYILIGSANVNQRSMDGQRDTEIAIGCYQSQVGADKQISQGDIHAYRMSLWCEHTSGTEELFLRPESLECVHGMRSIGDQMWEVYSNEEIVDMEGVHLVTYPVKVTQEGSVEDLPNGGDYFPDTKCPVKGKRSKLLPPIFTT* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1921 758 Pfam C2 domain 39 110 IPR000008 -
Dod10g1921 758 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
Dod10g1921 758 Gene3D C2 domain 35 136 IPR035892 -
Dod10g1921 758 Pfam Phospholipase D Active site motif 606 630 IPR001736 GO:0003824
Dod10g1921 758 Pfam Phospholipase D Active site motif 297 333 IPR001736 GO:0003824
Dod10g1921 758 SUPERFAMILY Phospholipase D/nuclease 421 687 - -
Dod10g1921 758 PANTHER PHOSPHOLIPASE D ALPHA 5 758 - -
Dod10g1921 758 PANTHER PHOSPHOLIPASE D 5 758 IPR015679 -
Dod10g1921 758 Gene3D Endonuclease Chain A 176 413 - -
Dod10g1921 758 SMART pld_4 296 333 IPR001736 GO:0003824
Dod10g1921 758 SMART pld_4 603 630 IPR001736 GO:0003824
Dod10g1921 758 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 603 630 IPR001736 GO:0003824
Dod10g1921 758 Pfam Phospholipase D C terminal 675 747 IPR024632 -
Dod10g1921 758 SUPERFAMILY Phospholipase D/nuclease 147 434 - -
Dod10g1921 758 Gene3D Endonuclease Chain A 416 658 - -
Dod10g1921 758 PIRSF PLD_plant 33 758 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Dod10g1921 758 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 39 130 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1921 Dod-Chr10 40854825 40857877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1921 31 758 Phospholipase D Gene Family (Wang group) AT1G55180 62.888 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1921 K01115 - gmx:100807431 1352.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1921 10 40854825 40857877 Dod10g1921 10 40854825 40857877 ECH
Dod10g1921 10 40854825 40857877 Dod06g2711 06 58152414 58156518 PCT