Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1907 ATGGGATTGCAGTTGATTTTCCTGTTAATTAAGCTACATTTAGTCCTCAGTGTTCCACAGCTTCATGAATTTGCAGCCACCAATCTGCACCATACCAGAGTCAGAAGCCACTCAAGTATTGCATTACCGCCGTCCAAGTCATCTAATTCTGAAATTCCTGCAACTATTACACTTCCACCTTCGAAGGCATTTTTTGGAGTTCATGGAACTATTGCACTTTCACCTTCCAAGTCATTCCCCAAAGCACCTACAAAGAAATGGACTCATGGTTTTGTGGATCCTCCAATATCACATGATCATAAGCAGCACTATTCCAGAAGAAAGTCCAGCAACCACACTCCTGGGCCAACCTACCCAATCCATCCTCATACTCATCAAGGTCCTTCAGTCTTCAAATCACAACCTCCTTTATCTTCACCTAAGAGCTGGGATTTTGCTGCACCCGCGCCTACACCTGCATCAGTTCACTTGAATGCGCCTTCTCCTTCGCCTAGAATCTCACCTCTAGGTTCATCATTGAAGAAGATAAAGCCTCCACCGCCAGCATTTGCTTTGGTTCTGCCACCTCCACCGCCTAATAAGGGTTGCATGATGATGAGTTGCTCAGAGCCATTGACAAACACACCCCCTGGATCACCTTGTGGTTGTGTGTGGCCTCTTCAAGTCAAACTCCGCATCAGCGTTGCAATATACGAGTTTTTTCCTTTGGTTTATGAACTAGCAGAGGAAATTGCATCCAGCCTTTTACTGAACCGCAACCAAGTCCGCATTGTGGGAGCTGATGCAGCAAGTCATCAACTAGAGAAAACCACTGTTCTAATAAACTTGGTACCCCAAGGGATCAAATTTGATGACATAACAGCATTTTTAATATATAAGAAATTCTGGCACAGGGAGATTCTCACAGATGCTTCCCTCTTTGGAGCCTATGAAGTACTCTATGTTCACTATCCAGGTCTTCCACCATCTCCACCGTCAACTCCTTCTGGTGTTTCTGGTATATATGTTGAACCAAACGATGGAACGCTATTGAAGCCTTTAGGAGTAGATGTCTCGAGCAAGAAAAAGGCAGGGAGTGGTGGAAGAATGGTTATTATGATCGTACTGTCATCTCTTACTGCTTTTGTTGTGTGTATTGGAGTTGCCTGGCTTTGTCTGGTGAAATGCCGCTCCTGTGCTCTTGAACCTGAACAAATTCCAGATGTTATAATTTCACCCTCTCCAAAACGGTCAGGGGCTGCTAGGTCATTGGCTTATGGAAGCAAGTCGGATTCTAGACCAGTGTCCATCCATTCTGGAACAATAGCATACACAGCATCAGCTAAGAAATTTACTTTGAATGAAATAGAGAAAGCAACAAATAACTTCAATCCTTCAAGAATATTAGGAGAAGGTGGCTTTGGTGTTGTTTACAAAGGTGACCTGCATGATGGAAGGGATGTGGCTGTGAAGACTCAACAAAGAGACGATCATCATGGTGGTCGTGAGTTCTTGGCTGAAGTTGAGACGCTTAGCCGCCTTCACCATAGAAATTTAGTTAAACTGATAGGTATATGCAGAGAGAAACAGATTCGCTGCCTAGTCTATGAGCTTGTACCTAATGGAAGTGTGGAATCCCACTTACATGGTGCGGACAAGGAAACAGATCCACTTAATTGGGATGCCCGGATGAAGATTGCACTTGGTGCTGCTCGAGGACTGGCTTATCTGCATGAGGATTCGAATCCATGTGTCATACATAGAGACTTCAAGTCCAGCAACATCTTGTTGGAATATGACTTCACACCCAAGGTTTCAGATTTTGGATTGGCTAGAACAGCACTGGATGAGAGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTATCTAGCTCCTGAATATGCAATGACTGGCCATCTTCTTGTGAAAAGTGATGTCTACAGCTATGGGGTTGTCCTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGACTGGTCACAACCTCCGGGTCAAGAAAACCTTGTTGCTTGGGTTCGTCCACTTCTTACAAGTAAGGAGGGGTTGCAGATGATCATTGACCCAGTTATAAAGCCCAGCATTTCTCTTGACACTGTGCTAAAAGTTGCAGCAATTGCATCCATGTGTGTACAACCAGAAGTCACTCAACGCCCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAGCTGGTATGCTGCGAGTTTGAGGAAACATGCTAG 2223 0.4467 MGLQLIFLLIKLHLVLSVPQLHEFAATNLHHTRVRSHSSIALPPSKSSNSEIPATITLPPSKAFFGVHGTIALSPSKSFPKAPTKKWTHGFVDPPISHDHKQHYSRRKSSNHTPGPTYPIHPHTHQGPSVFKSQPPLSSPKSWDFAAPAPTPASVHLNAPSPSPRISPLGSSLKKIKPPPPAFALVLPPPPPNKGCMMMSCSEPLTNTPPGSPCGCVWPLQVKLRISVAIYEFFPLVYELAEEIASSLLLNRNQVRIVGADAASHQLEKTTVLINLVPQGIKFDDITAFLIYKKFWHREILTDASLFGAYEVLYVHYPGLPPSPPSTPSGVSGIYVEPNDGTLLKPLGVDVSSKKKAGSGGRMVIMIVLSSLTAFVVCIGVAWLCLVKCRSCALEPEQIPDVIISPSPKRSGAARSLAYGSKSDSRPVSIHSGTIAYTASAKKFTLNEIEKATNNFNPSRILGEGGFGVVYKGDLHDGRDVAVKTQQRDDHHGGREFLAEVETLSRLHHRNLVKLIGICREKQIRCLVYELVPNGSVESHLHGADKETDPLNWDARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDWSQPPGQENLVAWVRPLLTSKEGLQMIIDPVIKPSISLDTVLKVAAIASMCVQPEVTQRPFMGEVVQALKLVCCEFEETC* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1907 740 CDD STKc_IRAK 462 730 - -
Dod10g1907 740 ProSiteProfiles Protein kinase domain profile. 456 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1907 740 Gene3D Phosphorylase Kinase; domain 1 429 531 - -
Dod10g1907 740 Gene3D Transferase(Phosphotransferase) domain 1 532 738 - -
Dod10g1907 740 ProSitePatterns Protein kinases ATP-binding region signature. 462 484 IPR017441 GO:0005524
Dod10g1907 740 PANTHER OS01G0750732 PROTEIN 6 739 - -
Dod10g1907 740 Pfam Protein tyrosine and serine/threonine kinase 460 729 IPR001245 GO:0004672|GO:0006468
Dod10g1907 740 PANTHER OS01G0750732 PROTEIN 6 739 - -
Dod10g1907 740 MobiDBLite consensus disorder prediction 93 141 - -
Dod10g1907 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Dod10g1907 740 SUPERFAMILY Protein kinase-like (PK-like) 437 729 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1907 Dod-Chr10 40622439 40626866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1907 193 738 Receptor kinase-like Gene Family AT5G56890 62.567 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dod10g1907 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1907 - - gmx:100775318 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1907 10 40622439 40626866 Dod06g2723 06 58328764 58334807 PCT