Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1904 ATGAACAATGGCACTTCAAGGAGCACCTCACAACAACAACAACAACAACAACAGGCTTGTGCTGCTTGTAAGCACCAACGCAAGAAGTGCGGTCCCAACTGCATTCTCGCACCATATTTTCCTCACAATCGCCAAACGGAATTCCTGAACGCCCATAAATTATTTGGGGTTGGCAAGATCAGCTCCATGATCAAGCCCCTGTCCCATGAAGACAGGAATATGGCCATGAAAACCATCATCTTCCAAGCTGATATGCGCGCCTATGACCCTGTCGGCGGTTGCTATAGGTTAATACAACAGCTTCAGTCACAGATTGGGTATCACCAGGCAGAGCTTCAACTCCTCCTTCAACAACTCGCCATGTTCAAAGCACAGTCTCAACATGCATACCATCCTCCCACAACACATGCCATTGTTAATAATTTCGATCATGCGGATCCCTTGAATTTGTACAACCCGGTACCGCCTAATAATGTTGCCGACAACAACTTCACTTGTCACCAATACCTTCAAGAGTTTCAACGTGAAGCTACTCATTTCGATAGCAATGGTACGTCAATGCATGAAGACCTTAGTGCATTGATCATGCGGAATTCTGTTTCATTGTCTCCTTTGGCGGGCTGCAATGGAAATGGGAACACCAGAGTTGACAATGATGATTATGGTTTCGATGGAAAGCCCATGATAGACCTTGGAATCGAAGGAATGAATTCGGATACTAAGCACTAA 729 0.454 MNNGTSRSTSQQQQQQQQACAACKHQRKKCGPNCILAPYFPHNRQTEFLNAHKLFGVGKISSMIKPLSHEDRNMAMKTIIFQADMRAYDPVGGCYRLIQQLQSQIGYHQAELQLLLQQLAMFKAQSQHAYHPPTTHAIVNNFDHADPLNLYNPVPPNNVADNNFTCHQYLQEFQREATHFDSNGTSMHEDLSALIMRNSVSLSPLAGCNGNGNTRVDNDDYGFDGKPMIDLGIEGMNSDTKH* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1904 242 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 239 - -
Dod10g1904 242 PANTHER LOB DOMAIN PROTEIN 16 239 - -
Dod10g1904 242 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
Dod10g1904 242 Coils Coil 98 118 - -
Dod10g1904 242 Pfam Lateral organ boundaries (LOB) domain 19 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1904 Dod-Chr10 40600741 40601469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1904 18 202 AS2 family AT3G13850 42.105 2.32e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod10g1904 LOB 3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1904 - - adu:107461308 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1904 10 40600741 40601469 Dod06g2727 06 58358787 58360663 PCT