Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1892 ATGGGTGCTTCGGGAAGATGGTTCAAATCAATTCTCTCTCTTAAAAAGACCTCAACAACTGATCAAGAGAAGGGTGGCGGTGATAACAAGAGTAAGAAGAAGTGGAAGATATGGAAGAACTCTTCCTCTTCAATGAAGAAGGGTGCTGTTGCTGCTGTTTCTGAAAAGTCTGATTCTTCTTCATTCACTGCTGCCATGGCTGCAGTGGTCCGAGCTCCACCAAAAGATTTCATGGCCATCAAGCAGAAATGGGCTGCCATACGCATTCAGGCCGTGTTTCGAGGCTTCTTGGCTAGAAGAGCTTTGAAGGCCCTGAGGGCAGTGGTAAGGTTGCAAGCTATTTTTCGAGGTCGGCTAGTGAGAAAGCAAGCAGCTGTTACCCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAGGCACATGTAAGGGCAAGGAATGTGAGGAACTCTCCAGAAGGGAAAGCAGTGCAGAAATTGTTAGATGAGCATCGCAATCAATCTGATCCTGTTAAGCAGGCTGAGCAAGGATGGTGTGACATTCCTGGAACTGTAGATGAAGTTGAGGCAAAGCTAAGAATGAGACAAGAAGGAGCCATCAAGAGGGATAGAGCCATGGCATACTCTCTATCCACACAGCAATCAAGAATGTGTCCTGGTCCAAACTCCAGAGGCACCAAGGCAGTGACCCCTTTCAAGCATCACAACATAGACAATAAGAGCTTAGGATGCAGCTTGTTAGAACGATGGATGGCATCAAAGCCATGGGAGAGTCCAATTTCCAAGAAAAGTCAACACCTTGTTCCTACCATTCAATCAAGAAGGAATGGTGTGACAACAAGGATTTCAGTTAGATCTCTTACAACCTCTCAGTCAACTCCATCGTCTTCGGGTATAAGCTCTGAATGCATGTATGATGACAGCCCTGTATCAACTTCATGTGCATCTGGATCACCATCTATGCCATCTACCAATACTCATGTGGTGGAAGGAGATGTTCATAGACCAAGTTACATGAATTTGACAGAATCAACCAAGGCCAAATTGAAGGGTTGCAGGTGTTCTTCACAGAATTCAAAGACACTCGTTATGGATGATTGTGTGTCTCATAGCACAACAGCATTTCTGAATGCAGATACTAGAAGCAGTGCTGGTTCTGATCCTTCAGTTAATTTATGGAAGGGTCTTTGTTCAACTCCTCTAAGGGCAAGTTATCAAAGACGATACATTGGGAGGTAG 1233 0.4509 MGASGRWFKSILSLKKTSTTDQEKGGGDNKSKKKWKIWKNSSSSMKKGAVAAVSEKSDSSSFTAAMAAVVRAPPKDFMAIKQKWAAIRIQAVFRGFLARRALKALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQAHVRARNVRNSPEGKAVQKLLDEHRNQSDPVKQAEQGWCDIPGTVDEVEAKLRMRQEGAIKRDRAMAYSLSTQQSRMCPGPNSRGTKAVTPFKHHNIDNKSLGCSLLERWMASKPWESPISKKSQHLVPTIQSRRNGVTTRISVRSLTTSQSTPSSSGISSECMYDDSPVSTSCASGSPSMPSTNTHVVEGDVHRPSYMNLTESTKAKLKGCRCSSQNSKTLVMDDCVSHSTTAFLNADTRSSAGSDPSVNLWKGLCSTPLRASYQRRYIGR* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1892 410 ProSiteProfiles IQ motif profile. 82 110 IPR000048 GO:0005515
Dod10g1892 410 SMART iq_5 81 103 IPR000048 GO:0005515
Dod10g1892 410 SMART iq_5 104 125 IPR000048 GO:0005515
Dod10g1892 410 PANTHER IQ-DOMAIN 5-RELATED 1 407 - -
Dod10g1892 410 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Dod10g1892 410 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 407 - -
Dod10g1892 410 MobiDBLite consensus disorder prediction 21 35 - -
Dod10g1892 410 Gene3D - 79 129 - -
Dod10g1892 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 124 IPR027417 -
Dod10g1892 410 MobiDBLite consensus disorder prediction 18 42 - -
Dod10g1892 410 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Dod10g1892 410 Pfam IQ calmodulin-binding motif 84 103 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1892 Dod-Chr10 40513725 40516224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1892 1 394 IQD Protein Family AT1G72670 44.444 4.22e-96 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1892 - - gmx:100816492 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1892 10 40513725 40516224 Dod06g2739 06 58470392 58473437 PCT