Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1873 ATGACAGGGGGGAGGATAAGGGCAAGGTTCCGCAGGAGCCACCTTTACACATTTGGTTGCATCCGCCCAGCTACCACTGATGAGGTGCCTCATCCCCTCCATGGTCCCGGGTATTCGCGAACCGTGTATTGCAACCAGCCCCTGCTCCATGAAAAGAAATCCCTATTTTACTGCAGGAATAACATATCAACCACCAAGTACAATGTCATTACATTCTTGCCCAAGGCACTCTTTGAGCAATTCAGGAGGGTGGCTAACATATACTTCCTTTTGGCTGCTTGCCTATCAGCCTCCCCAATTTCCCCTTTCAGCCCTCTGAGCATGATTGCTCCGCTGGCGTTTGTTGTTGGTCTTAGTATGGCGAAGGAAGCGTTGGAGGATTCCCGCAGGTTCCTTCAGGATGTCAAGGTTAATCGCCGGAAAGTTAGTGTCCATAAAGGCAATGCTAATTTCAGCGCCACATCGTGGCAGAGAATTATGGTTGGGGATGTGGTTAAAGTAGAGAAGGACCAATTTTTTCCAGCTGACTTGCTTTTCTTGTCTTCAAGTTATGAGGATGGGATATGTTATGTGGAGACAATGAATTTAGACGGAGAGACCAACTTGAAGGTGAAAAGATCTGTGGAGGCTACCCTGTCTCTGGATAATGATGGAGCTTTTCAGGATTTTGTGGGATCAATACATTGTGAAGACCCAAATCCCAATCTCTATAGCTTTGTTGGCAACTTTGAGTATGAACAGCTGGTTTATCCTCTTGATCCTACTCAAATTCTCCTCCGAGATTCAAAGCTTAGGAATACTAATTATGTCTATGGAGTGGTCATATTCACTGGTCATGATAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAAAGGAGCACAATAGAAAAAAAGATGGACTATATAATATATGCTCTTTTCTCCGTCCTCATTTTAATATCATTTATTAGTTCAATAGGTTTTGTTGTAAAGACCAAATACCAAGTCCCAAAGTGGTGGTATCTTCGGCCTGACAATATCGAATACCAGTATGATCCTAAAAAGATTGGATTGGCCGGGATGAGCCATCTGATTACTGCACTCATTCTTTATGGGTATTTGATACCCATCTCTCTTTATGTTTCAATTGAGGTTGTGAAGGTATTACAGGCAACCTTCATTAACCAAGACATTCAAATGTATGATGAAGAAACTGGGACTCCAGCTGATGCACGGACATCAAATTTAAATGAAGAATTGGGTCAGGTAGACACTATCCTCTCTGATAAGACTGGAACACTAACCTGCAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTACTGCTTATGGTGTGCGTTCCAGTGAAGTTGAACTTGCTGCTGCAAAGCAGATGGCTTCTGATCTGGAGGAGCAGGATGAGGATTCAGATCTCTCTAATTTCCCCATGCCTAAGAGTAGAGTTCCACAAGAAAATGTTGGAAAAGCTGAAGAAATTGAATTGGAGACCATTGTAACTTCCAAGGGTGATGAGGGTAAAAAGATTGCTATAAAGGGATTTGGTTTTGAAGACAGCCGCCTCATGAATGGTAACTGGTTGAAAGATCCCAATGCCGATGTCATGCTATTGTTTTTCCGGATATTAGCAGTTTGCCATACTGCTATTCCTGAGCTGAATGAGGAGACTGGCATTTGTACATATGAAGCTGAGTCACCTGATGAAGGGGCTTTTCTTGTAGCAGCAAGAGAATTTGGTTTTGAATTTTGTAGAAGAACTCAATCAACTGTTGTTGTGCGTGAAAGGATTTGTGCTTCAGGAGAAGTGATAGAAAGAGAGTATAAGATATTGAATCTGCTTGATTTCACGAGCAAAAGAAAGCGTATGTCAGTGATTGTGCGTGATGAGGAGGGAAACATTATTCTTTTGTGCAAAGGAGCAGACAGTATCATATTTGATCGATTGTCACAGAATGGAAATTTGTATTTGGAGGCTACTACTAGACATTTGAATGAATATGGAGAATCTGGTTTGAGAACACTTGCCCTGGCTTACAGAAAGCTTGATGAACAGGAGTACTCTGATTGGAATAATGAGTTTCAGAAAGCTAAGACAGCTGTTGGGTCTGACAGAGAGGCAATGCTTGAGCAGATATCAGATATTATGGAAAGAGAGTTGATTGTTGTTGGGGCTACTGCAGTGGAAGACAAATTGCAGAAAGGGGTGCCTCAATGCATTGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACTGCAGTCAACATTGGCTTTGCTTGTAGTTTGCTTCGACAGGGCATGAGGCAAATCTGTATTACTATGGATTCAGATTCAGTAACCATTGATCGCCTAGAGGTCATCAAGGGCAATATCTTGAACCAAGTCACCAATGCCTCACAAATGATAACGATGGAGAAGGATCCACATGCTGCGTTTGCATTAATCATTGATGGAAAAACTCTAACATATGCTTTAGAAGATGATATGAAGCACCAATTTTTGGGATTAGCTGTTAAGTGTGCATCTGTCATTTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACACGGTTAGTGAAAGAAGGAACTGGAAAGACCACCCTTGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTGCTATTGCCCAATTTCGGTTTCTGGAGCGGCTGCTGGTAGTCCATGGACACTGGTGTTATAAGAGAATTGCACAAATGATATGCTATTTCTTCTACAAAAATATTGCATTTGGCCTCACCATATTCTATTTTGAGGCCTTTGCCGGATTTTCTGGTCAATCGGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTACTTACATCATTGCCTGTCATTTCACTTGGAGTTTTTGAACAAGATGTTCCGTCAGAAGTTTGCTTGCAGTTTCCTGCACTGTATCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTGTCTATTCCTCCCTAATCATCTTCTTCCTCGTTGTAATCATCTTCTTTGACCAAGCATTCCGTGCAAATGGCCAAATTGCTGATATGGCAGCTGTTGGTACAACAATGTTCACTTGCATCATCTGGGCTGTCAACTGTCAGATTGCACTGACAATGAGCCATTTTACATGGATCCAACACCTCTTTGTGTGGGGTAGCATAGCCACTTGGTACCTCTTTCTTTTGTTATATGGCATGCTTTCTCCAAAATATTCCCAGAATGCCTACCAAATATTGGTTGAAGTTCTTGCTCCTGCTCCTATTTATTGGACAGCAACCATCTTGGTAACAATTACATGCAATCTTCCTTATCTTGGCCACTTATCCTTCCAAAGATGTTTTAATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAGGAAGGACATTGAAGATCAACATATGTGGACGAGGGAGAGTTCTAAAGCAAGACAGGAAACGAAGATTGGATTCACGGCAAGAGTGGAAGCTAAGATCAGGCATTTGAAAGGGAGACTGCAGAAGAAGCAATCTTCACTGGGGATTTTGTCCCCATCATGA 3672 0.4216 MTGGRIRARFRRSHLYTFGCIRPATTDEVPHPLHGPGYSRTVYCNQPLLHEKKSLFYCRNNISTTKYNVITFLPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKVSVHKGNANFSATSWQRIMVGDVVKVEKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSVEATLSLDNDGAFQDFVGSIHCEDPNPNLYSFVGNFEYEQLVYPLDPTQILLRDSKLRNTNYVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYALFSVLILISFISSIGFVVKTKYQVPKWWYLRPDNIEYQYDPKKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDLEEQDEDSDLSNFPMPKSRVPQENVGKAEEIELETIVTSKGDEGKKIAIKGFGFEDSRLMNGNWLKDPNADVMLLFFRILAVCHTAIPELNEETGICTYEAESPDEGAFLVAAREFGFEFCRRTQSTVVVRERICASGEVIEREYKILNLLDFTSKRKRMSVIVRDEEGNIILLCKGADSIIFDRLSQNGNLYLEATTRHLNEYGESGLRTLALAYRKLDEQEYSDWNNEFQKAKTAVGSDREAMLEQISDIMERELIVVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAVNIGFACSLLRQGMRQICITMDSDSVTIDRLEVIKGNILNQVTNASQMITMEKDPHAAFALIIDGKTLTYALEDDMKHQFLGLAVKCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGVYSSLIIFFLVVIIFFDQAFRANGQIADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIATWYLFLLLYGMLSPKYSQNAYQILVEVLAPAPIYWTATILVTITCNLPYLGHLSFQRCFNPMDHHIIQEIKYYRKDIEDQHMWTRESSKARQETKIGFTARVEAKIRHLKGRLQKKQSSLGILSPS* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1873 1223 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1221 - -
Dod10g1873 1223 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Dod10g1873 1223 SUPERFAMILY HAD-like 410 924 IPR036412 -
Dod10g1873 1223 MobiDBLite consensus disorder prediction 462 488 - -
Dod10g1873 1223 Gene3D - 576 698 IPR023299 GO:0000166
Dod10g1873 1223 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Dod10g1873 1223 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Dod10g1873 1223 PRINTS P-type cation-transporting ATPase superfamily signature 774 784 - -
Dod10g1873 1223 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1166 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod10g1873 1223 Gene3D - 419 431 IPR023214 -
Dod10g1873 1223 SFLD p-type atpase 405 931 IPR044492 -
Dod10g1873 1223 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Dod10g1873 1223 Gene3D - 432 457 IPR023299 GO:0000166
Dod10g1873 1223 Gene3D - 720 920 IPR023214 -
Dod10g1873 1223 Gene3D - 111 288 - -
Dod10g1873 1223 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1147 IPR023298 -
Dod10g1873 1223 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1221 - -
Dod10g1873 1223 SUPERFAMILY Calcium ATPase, transduction domain A 148 286 IPR008250 -
Dod10g1873 1223 Coils Coil 448 468 - -
Dod10g1873 1223 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1158 IPR032630 -
Dod10g1873 1223 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Dod10g1873 1223 SFLD C1.7: P-type atpase like 405 931 - -
Dod10g1873 1223 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 851 961 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod10g1873 1223 Pfam Cation transport ATPase (P-type) 547 651 - -
Dod10g1873 1223 CDD P-type_ATPase_APLT_Dnf-like 59 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1873 Dod-Chr10 40197059 40202673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1873 1 1221 Primary Pumps ATPases AT1G17500 73.732 0.0 1910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1873 K01530 - gmx:100778710 2165.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1873 10 40197059 40202673 Dod06g2747 06 58626912 58630484 PCT