Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1857 ATGTCTAGCAAAGTTGGTCAGGTCATCAAGTGCAAAGCTGCGGTGGCATGGGAAGAAGGGAAGCCACTAGTGATTGAAGAAGTAGAGGTAGCCCCTCCACAGGCTGATGAAGTTCGTTTGAAGATACTCTACACCTCTCTTTGCCATTCTGACATTTACTTCTGGGACGGCAAGGGCCGGAAATTGTTATTTCCCCGCATACTTGGTCACGAAGCAGCAGGGATTGTGGAAAGCGTAGGGGAAGGTGTGACTCATCTCAAACCAGGGGACCATGTCCTCCCTGTATTTACTGGAGAGTGTGGGGAATGCCCACAATGTAAGTCTGAAGAGAGCAACTTGTGTGACGTGCTGAGGCTGGACACGGATAGGGGTGTTATGCTCAGTGATGGTCAGTCAAGGTTCTCCAAGAATGGAAAGCCCATTTACCACTTCTTGGGAACCTCTACATTTAGTGAATACACTGTTTCACATTCCAAATGTGTTGCAAAGATCAACCCTGCTGCCCCACTTGACAAAGTTTGTGTTCTCAGCTGTGGAATCTGCACAGGACTTGGTGCCACTTTAAACGTGGCAAAACCAAAGCCTGGTTCCACTGTTGCTGTCTTTGGATTGGGAGCTGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGCTTTCTGGTGCATCAAGAATCATTGGGGTTGATATACTTTCCAGCCGATTTGAACAAGCCAAGAACTTTGGAATCACTGAGTTCTTGAACCCAAAAGATCACGACAAACCTATACAACAGGTAATTGTTGAAATGACCAAGGGAGGAGTTGATCGTGCTCTTGAATGCACTGGAAGCGTCGATGCTGCAATTTCAGCATTTGAATGTGTTCATGATGGTTGGGGTGTTGCTGTACTTGTTGGTCTGCCTAAAGATGATGATGTATTCAAAACCAAGACCATCAATTTCTTGTATGAGAGGACCGTTAAGGGTACCTTCTATGGAAACTACAAACCGGTCTCGGATATTCCAGCTGTTGTGGAGAAGTACATGAACAAAGAGCTAGACCTGGATAAATTCATCACTCACTCAATCACATTCTCAGAGATCAACAAATCATTCGAATACATGCTGAAAGGAGAGTCAATCAGGTGCCTCATCCGCATGGAAGGCTGA 1143 0.4619 MSSKVGQVIKCKAAVAWEEGKPLVIEEVEVAPPQADEVRLKILYTSLCHSDIYFWDGKGRKLLFPRILGHEAAGIVESVGEGVTHLKPGDHVLPVFTGECGECPQCKSEESNLCDVLRLDTDRGVMLSDGQSRFSKNGKPIYHFLGTSTFSEYTVSHSKCVAKINPAAPLDKVCVLSCGICTGLGATLNVAKPKPGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDILSSRFEQAKNFGITEFLNPKDHDKPIQQVIVEMTKGGVDRALECTGSVDAAISAFECVHDGWGVAVLVGLPKDDDVFKTKTINFLYERTVKGTFYGNYKPVSDIPAVVEKYMNKELDLDKFITHSITFSEINKSFEYMLKGESIRCLIRMEG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1857 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Dod10g1857 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Dod10g1857 380 CDD alcohol_DH_plants 9 377 - -
Dod10g1857 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Dod10g1857 380 PANTHER ALCOHOL DEHYDROGENASE 4 377 - -
Dod10g1857 380 Gene3D - 20 370 - -
Dod10g1857 380 Pfam Zinc-binding dehydrogenase 206 328 IPR013149 -
Dod10g1857 380 PANTHER ALCOHOL DEHYDROGENASE-RELATED 4 377 - -
Dod10g1857 380 Gene3D - 183 321 - -
Dod10g1857 380 SUPERFAMILY GroES-like 5 186 IPR011032 -
Dod10g1857 380 SUPERFAMILY GroES-like 328 377 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1857 Dod-Chr10 40005256 40008275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1857 36 368 Monolignol Biosynthesis Gene Families AT1G72680 25.740 1.44e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1857 K18857 - gmx:100800668 634.795