Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1856 ATGAGCTTGGGTACTGCCGAGGAAGAATCGGCACCAGAGGTTCATGTCCCAGCCGATATTGATTGGCATAAGCTTGATAAATCCAAGTTTTTCTTCCTTGGCGCAGCACTTTTCTCTGGGGTTTCAGCAGCACTGTACCCCGTTGTTGTGTTGAAAACGAGGCAGCAAGTGGCTCAGTCCCAAGTTTCTTGCATCAAGACTGCGTTTTCAGTGATTAGGCATGAGGGTTTCCGAGCACTGTATAGAGGGTTTGGTACCTCTTTGATGGGTACAATCCCTGCTAGAGCCTTATACATGGCTGCACTGGAAATTACCAAGAGTAATGTGGGCACTTCCACTGTTAGGTTTGGGATAGCTGAACCAACTGCTGCCACAATTGCCAATGCAGTTGCAGGCTTGAGTGCAGCCATGGCTGCTCAACTTGTGTGGACCCCAGTCGATGTTGTGAGCCAGAGGCTGATGGTTCAGGGTGGTTCTAATCCTCCTGGCAATACGAAGGGATCCGCACGGCAATATGCCAATGGGATTGATGCCTTCAGGAAGATACTCAAAACAGATGGCCCTAGGGGGTTGTATAGGGGTTTTGGGATATCAATTGTGACTTATGCACCTTCAAATGCTGTTTGGTGGGCTTCATATTCTGTTGCACAGAGGATGGTTTGGGGTGGAGTTGGGTACTACTTGTGCAAGAGACGTGGTGAGAGGGGTGACACTGCAGCAGTTAATGAATTGAGGCCAGATTCAAAAACAGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCAGGTGGCATGTCTGCTTTGATTACAATGCCATTGGATACAATTAAGACGAGGCTGCAGGTCTTGGATGGTGATGAGAATGGCCGAAGAGGACCTACAGTTGTGCAGACAGTGAGGAATTTGGTTAAGGAAGGTGGTTGGATGGCATGTTACAGAGGATTGGGACCAAGATGGGCTTCAATGTCGATGTCTGCAACAACAATGATCACTACTTACGAGTTTCTAAAACGACTGTCCACGAAGAATCAAGAGGTTTTGACATGA 1047 0.4804 MSLGTAEEESAPEVHVPADIDWHKLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVAQSQVSCIKTAFSVIRHEGFRALYRGFGTSLMGTIPARALYMAALEITKSNVGTSTVRFGIAEPTAATIANAVAGLSAAMAAQLVWTPVDVVSQRLMVQGGSNPPGNTKGSARQYANGIDAFRKILKTDGPRGLYRGFGISIVTYAPSNAVWWASYSVAQRMVWGGVGYYLCKRRGERGDTAAVNELRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVVQTVRNLVKEGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQEVLT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1856 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 250 339 IPR018108 -
Dod10g1856 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 219 IPR018108 -
Dod10g1856 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Dod10g1856 348 SUPERFAMILY Mitochondrial carrier 24 336 IPR023395 -
Dod10g1856 348 Gene3D Mitochondrial carrier domain 29 346 IPR023395 -
Dod10g1856 348 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Dod10g1856 348 Pfam Mitochondrial carrier protein 253 343 IPR018108 -
Dod10g1856 348 Pfam Mitochondrial carrier protein 125 220 IPR018108 -
Dod10g1856 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 345 - -
Dod10g1856 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1856 Dod-Chr10 39998750 40000744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1856 1 345 Chloroplast and Mitochondria Gene Families AT1G72820 74.425 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1856 K15121 - gmx:100784616 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1856 10 39998750 40000744 Dod10g1856 10 39998750 40000744 ECH