Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1836 ATGGACCTGAGCCCTTACACTTCAAGGAAAACAACACACTTCAACAACAACAACCACAACCAGAACAACAACATTGGCCATGATCATGCTGCATCCATAGACATGCACCGCAGCAATAACCATAGCCACAACACTTCCACAAGCCGTTCTTCTGACTCAGGTGAGCCAAGTGAGGATGGTAAATGGGCCCCCAAGTACCTCAGGGAGTGTGCTAGAGCAATATCAGACGGAGACTCCAGCAAGATCCACCACCTTCTCTGGATGCTAAACGAGCTCGCTTCCCCTTATGGTGACTTGGATCAGAAACTAGCCTCTTACTTCTTGCAAGCTCTATTTTGCAAGGCCACTGAATCTGGCCAGAGGTGCTACAAGACCCTAACATCTGTTGCTGAGAAGAATCACTCTTTTGATTCAGCAAGAAAGTTGATACTCAAGTTTCAAGAAGTAAGTCCTTGGACAACTTTTGGACATGTTGCTTCAAATGGTGCCATTTTGGAAGCCTTGGAAGGTGAGAACAAACTCCACATAATTGATATTAGCAACACCCTTTGCACTCAGTGGCCTACTCTATTGGAAGCCTTGGCCACTAGGAACGATGAAACCCCTCACCTCAAGCTCACGGTTGTGGCTCTAAGTGCTAGCATACTAGGGTCTGTGATCAAGGAAGTTGGTCAAAGAATGGAGAAGTTTGCAAGGCTGATGGGTGTGCCCTTTGAATTCAACGTGATAAGTGGGTTGGATCACCTAGGGGAGCTCACAAAAGAAGGTTTAGGGGTTCAAGAGGATGAAGCTATTGCAGTGAATTGTGTTGGGGCATTGAGAAGAGTGGAAGTGGAAGAAAGGGAAGCTGTGATTCGCATGTTCAAGTCTCTTAGTCCTAGAGTGGTAACCGTTGTTGAGGAAGAAGCTGATTTTTGCAGCTCAAGGAATGATTTTGTTCAGTGCTTTGAAGAGTGCCTTAAGTTTTACAGCATCTACTTTGAGATGCTAGAGGAGAGTTTCCCCCCAACAAGCAATGAAAGGTTGATGTTGGAGAGGGAGTGTTCAAGGAGCATAGTTAGGGTTTTGGCTTGTGGCGGTAGTAGTGATCATGAGTTTGAAGATGGTGGTGATGGAGGCGGAGGAGGTGATTGTTGTGAGAGAAGGGAGAGAGGGGCACAGTGGTCTGAAAGGCTTAACAAGGCATTTTCCCCAGCTGTTTTCAGTGATGATGTTGTTGATGATGTCAAAGCATTGCTCAAGAGGTACAGGGGTGGTTGGTCACTTGTGGTGCCTCAAGGAGATAATCATCTCTCAGGAATTTATTTGACATGGAAGGAGGAGCCTGTGGTTTGGGCATCAGCATGGAAACCCTAG 1356 0.4646 MDLSPYTSRKTTHFNNNNHNQNNNIGHDHAASIDMHRSNNHSHNTSTSRSSDSGEPSEDGKWAPKYLRECARAISDGDSSKIHHLLWMLNELASPYGDLDQKLASYFLQALFCKATESGQRCYKTLTSVAEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGENKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVALSASILGSVIKEVGQRMEKFARLMGVPFEFNVISGLDHLGELTKEGLGVQEDEAIAVNCVGALRRVEVEEREAVIRMFKSLSPRVVTVVEEEADFCSSRNDFVQCFEECLKFYSIYFEMLEESFPPTSNERLMLERECSRSIVRVLACGGSSDHEFEDGGDGGGGGDCCERRERGAQWSERLNKAFSPAVFSDDVVDDVKALLKRYRGGWSLVVPQGDNHLSGIYLTWKEEPVVWASAWKP* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1836 451 PANTHER PROTEIN SHORT-ROOT-LIKE 32 450 - -
Dod10g1836 451 ProSiteProfiles GRAS family profile. 54 450 IPR005202 -
Dod10g1836 451 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 450 IPR005202 -
Dod10g1836 451 MobiDBLite consensus disorder prediction 37 53 - -
Dod10g1836 451 MobiDBLite consensus disorder prediction 1 28 - -
Dod10g1836 451 Pfam GRAS domain family 66 450 IPR005202 -
Dod10g1836 451 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1836 Dod-Chr10 39813285 39814878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1836 43 451 GRAS Transcription Factor Family AT4G37650 51.740 2.09e-145 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod10g1836 GRAS 3.5e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1836 - - gmx:100818806 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2207 06 47343221 47346326 Dod10g1836 10 39813285 39814878 PCT