Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1835 ATGGAAATAAAGAGAGGGAAGGGGCCCCAGGAGAGACCCTTGGTGGCTAGCAGGAGGGTGAGAGATTGCATAAGACCTTACGACCAAGGGTATCCACTGTTGATCACGATAACTAATCTCAACGCTAGTTTGCAGCCGAAGCAAATTCATGAGATCAAGGACTTCCTTCTCACCGCAAGGAGGAAGGATGCGCGGTCAGTGAAAATCAAGAGGAGCAGAGATGTGGTCAAGTTCAAGGTCCGTTGCTCCAAGTACCTGTACACCCTCTGTGTATTTGACTCTGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTAG 324 0.4877 MEIKRGKGPQERPLVASRRVRDCIRPYDQGYPLLITITNLNASLQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPG* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1835 107 PANTHER 60S RIBOSOMAL PROTEIN L38 46 107 - -
Dod10g1835 107 Pfam Ribosomal L38e protein family 46 107 IPR002675 GO:0003735|GO:0005840|GO:0006412
Dod10g1835 107 PANTHER 60S RIBOSOMAL PROTEIN L38 46 107 IPR002675 GO:0003735|GO:0005840|GO:0006412
Dod10g1835 107 Gene3D - 45 107 IPR038464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1835 Dod-Chr10 39808484 39810702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1835 46 107 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 93.548 3.10e-38 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1835 K02923 - var:108325348 128.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1835 10 39808484 39810702 Dod10g1835 10 39808484 39810702 ECH