Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1820 ATGGGGTTCTCGGCATCAAAAATATTTATTGGGTTTCAGTTTCAATTTGTGGTTTTGTCAAGCCTATGGTTGCCAATTTCAAGTTTTGGTTCCATGTCTTCTGTTGCCACCTCTTTTGGCTACCAAGGTTATGCTTTTTGTGGTTTGAAATCAGATGGGTCTTATACTGTGACCTGTAATGGAACAAACTCAGAAATAATTCATGGAACACCACACCATTACCCATTCCTTGGTCTAACCGGTGGCTATGGCTTTGTATGTGGGCTTTTGATGAATGCTAGTCTACCTTATTGCTGGGGTAGCAATGAAATTATTAGAGAAAGAATGGGTGTGCCGCAACCTATGGTTGATGGCGCTCAGTACATAGAAATTGGTGCTGGGGATTACCACCTTTGTGGATTGAGGAAATCCTTAAGGGGAAGAAGGCAGAGGATCGTTTCTTTTGTTGATTGTTGGGGTTACAACATGACAGGTACTTATGTGTTTGAGGTGCAGATTCAATCAATCTCAGTTGGTTCTAGGTTCAACTGTGGCTTGTTTTCCCATAATAAGACTGTCTTCTGCTGGGGTGATGATACTAACAACCCGGTTATTCGTTTGATTCCTCGAGGCATGAGATTCCAGAAGCTTGTTGCTGGTGGGAGTCATGTATGTGGAATCTTAGAAGGACTGAATTCTAGAACTGTATGTTGGGGAAGTAGCAATAATATCTCGATAAAAGGCCAAGCAGATGTTTTATTGCCTCCAAATAATCCCATGATTTCTATAGTGGCAGGAAGGTTCCATGCTTGTGGCATTAAGAGCCATGATCATGGAGTCATTTGTTGGGGCTATACTTATGGCAGGGGCACACCACTTCCTACCGGGACTAAGATCATTGAGATTGCTGCTGGGGACTATTTTACTTGTGGAATACTTGTCGAGGAATCTCATCGACTTGTTTGCTGGGGTCTTGGCTTCCCTAACCCTTTCCCATCATTTGTCTTGCCAGGGAAGTGTGCTTCTACTTCATGTCCTTCGGGTTACTATGAAATGGACCAGAACAAGCATCATTGTAACTCCTCAAAACCTCACTTTTGCTATCCTTGCAGCGGTCCTTGTCCTTATGAAATGTATCAGACAATTGGCTGCAATTTGACATCTGACAGATTATGTGCATATAACTGTTCTAATTGTTTCTCACATGAATGCTTCTCCCATTGCTCTTCTACTCCTACCATTAGGAACAAAGATGAAAGATTTCGGTCTATGCGGGTCTCAGCTCTTCTTATTGCACATATAGCTTTTGGAGTTTTATTGGCTAGTATTCTATCTATAACTGCAATTTTATATGTCCGCCACAAGTTAAGGGATTGTCAATGTTCAGCAATAAGGTCCAAGGGGAAGAAACTTAATAGCAATTCTTCATCCCAAAGGGAGAACAAGAAGATCCGCCCGAACTTGGAGGAGTTCAAGATTAGGAAGGCCAAGAGGTTCACTTATGAGGAACTTGAGAAGGCAACTGGTGGATTCAAAGAAGAGTCCATAGTGGGGAAGGGAAGTTCCTCGCGTGTGTTCAAGGGTGTCTTGGAAGATGGGACTGTTGTTGCTATTAAGAGGGCCATAAGGTATTCCAACATGCAAAGGAATTCCAATGATTTCCACACAGAGCTTGGCTTGCTCTCCAGGTTGAACCATGCCCACTTGCTCAATCTCCTAGGCTATTGTGAAGAAGGTGGAGAGATAATTCTTATTTATGAGTTCATGGCTCACGGTTCTCTGCATAAACACCTCCATGGCCAGAACAAGGAGTTGAAGGAGCAGTTGGATTGGGTCAAAAGGGTAACAATTGCAGTCCAAGTAGCTCGGGGAATAGAATATTTGCATGGCTATGCTTGCCCTCCTGTGATTCATAGAGACATCAAGTCTTCAAACATCCTCATCGATGAAGAGCACAATGCTCGAGTGGCCGATTTCGGTTTGTCATTGCTTGGTCCTGTAGATAGTAGCACCCCACTGTCTGAGCTACCAGCTGGGACACTTGGTTATCTTGATCCTGAATACTACAGGCTCCATTATCTCACAACAAAATCAGATGTCTACAGCTTTGGTGTCCTGCTTCTTGAACTCTTAAGTGGTAGAAAAGCTATTGACATGCAATATGAAGAAGGGAACATAGTTCAATGGGCGAAACCTCTCATCAAGTCCGGAGATATTTCTGCGATCTTGGACCCGGTTCTGAAACCTCCTCCTGATCTTGCAGCCTTGAGAAAGGTTGCCATTGTGGCTTGCAAGAGTGTGAAAACGACAAGGAGGGATAGGCCTTCAATGGACCAAATAACAACAGCTTTGGAGCGAGCTCTCGCGCAGTTAATGGGTAGCCCTTGTAATGAGCAGCCAATTTTGCCAACTAAGGTGGTTTTGGGGAGTAGCAGGTTGCAAATGAGATCTTCAAACAGGTCAGAAATTGATGTCCCTGAAAATGAGGACAAGGGGCTTGAGTTTAGAGCACCCTCATGGATAACTTTCCCTAGTGCAACTTCTTCCCAAGGGATAAAGTCACCAAGCACAGAAGCTGAGGTTGATGTGAAGAATAATGCAGAAGGGAAGAACAATGTGGGAGGAAGTGGTGGTGGTGATGTTTTCACAAGTCTTGAGGAAGAGATTGGTCCTGCTTCTCCTCAAGAGAGGCTGTTCTTGCAGCACAACTTCTAA 2694 0.4388 MGFSASKIFIGFQFQFVVLSSLWLPISSFGSMSSVATSFGYQGYAFCGLKSDGSYTVTCNGTNSEIIHGTPHHYPFLGLTGGYGFVCGLLMNASLPYCWGSNEIIRERMGVPQPMVDGAQYIEIGAGDYHLCGLRKSLRGRRQRIVSFVDCWGYNMTGTYVFEVQIQSISVGSRFNCGLFSHNKTVFCWGDDTNNPVIRLIPRGMRFQKLVAGGSHVCGILEGLNSRTVCWGSSNNISIKGQADVLLPPNNPMISIVAGRFHACGIKSHDHGVICWGYTYGRGTPLPTGTKIIEIAAGDYFTCGILVEESHRLVCWGLGFPNPFPSFVLPGKCASTSCPSGYYEMDQNKHHCNSSKPHFCYPCSGPCPYEMYQTIGCNLTSDRLCAYNCSNCFSHECFSHCSSTPTIRNKDERFRSMRVSALLIAHIAFGVLLASILSITAILYVRHKLRDCQCSAIRSKGKKLNSNSSSQRENKKIRPNLEEFKIRKAKRFTYEELEKATGGFKEESIVGKGSSSRVFKGVLEDGTVVAIKRAIRYSNMQRNSNDFHTELGLLSRLNHAHLLNLLGYCEEGGEIILIYEFMAHGSLHKHLHGQNKELKEQLDWVKRVTIAVQVARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSSTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLELLSGRKAIDMQYEEGNIVQWAKPLIKSGDISAILDPVLKPPPDLAALRKVAIVACKSVKTTRRDRPSMDQITTALERALAQLMGSPCNEQPILPTKVVLGSSRLQMRSSNRSEIDVPENEDKGLEFRAPSWITFPSATSSQGIKSPSTEAEVDVKNNAEGKNNVGGSGGGDVFTSLEEEIGPASPQERLFLQHNF* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1820 897 Gene3D Phosphorylase Kinase; domain 1 474 581 - -
Dod10g1820 897 PANTHER RECEPTOR-LIKE KINASE 7 897 - -
Dod10g1820 897 Gene3D Transferase(Phosphotransferase) domain 1 582 789 - -
Dod10g1820 897 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Dod10g1820 897 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1820 897 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 337 385 IPR001368 GO:0005515
Dod10g1820 897 MobiDBLite consensus disorder prediction 857 890 - -
Dod10g1820 897 Pfam Protein kinase domain 504 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1820 897 SMART serkin_6 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1820 897 SUPERFAMILY RCC1/BLIP-II 38 278 IPR009091 -
Dod10g1820 897 Gene3D - 73 340 IPR009091 -
Dod10g1820 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Dod10g1820 897 SUPERFAMILY Protein kinase-like (PK-like) 482 777 IPR011009 -
Dod10g1820 897 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 7 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1820 Dod-Chr10 39709390 39712384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1820 15 897 Receptor kinase-like Gene Family AT3G59420 60.156 0.0 1054
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dod10g1820 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1820 - - gmx:100809215 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1820 10 39709390 39712384 Dod10g1820 10 39709390 39712384 ECH
Dod10g1820 10 39709390 39712384 Dod05g0543 05 7898095 7901641 ECH
Dod03g3034 03 63146062 63149686 Dod10g1820 10 39709390 39712384 PCT