Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1815 ATGTGTTCAAAACGTTCTGGCCAAGGGAATGACCCTATTTCAGGGCAAGTGCGCACCAGTGACAGGATCAAGGTGAGGAGTCGGACAAACCTGTATGGCCGACCATACTTCTATTACAACCCAAATATTTTGCGCAACGGGAAAAGCAAGACCAAGAACAGGACAGCAGCTTCACGAATTGCCAAGATGTTGCGTCCTGAAAATCGGCATGCACAAGACTTAAATGCTAATGCGGGCTCTGGCAGTCTTCGTCGTTCAACTAGGAAGAGAAGGATTGTAAATCTTGGAGATTACACTGATAGTTCTGGAGCTGAGGATGAAGACCTAATGAAACCTGCATATAAATCCTTGAGAAACCAGATTGACAATAGTGTCAGCCAGTATGAGATGATGTCTTCTAAGCGCAAAAGAGCTGTGGAGACTAGATCAACCCCTCGACGTGAAGGTCTACGACCTCGTCGTTTGAGGGCTGCTGTAAGAGAACAAAAAATTTTAGAACCAGATGATGAGCAGGAACTTTCAGAAGAGAAGGTTGGGCAAGATGAAACAGAAAATGGGAATGATGCAGATGATGGTCAGAATGAGATTGAAGGGGATGCGGAGGATGAAGGCGAAGAAGATGGTGATGATGAAGAGGGCGAAGAAGAGCAGGATGGAAGAAGGCGTTATGATCTTCGAAATCGTGCAGATGTTCGCAGGTTCTCTACGGAGGTAGGCAAGGCCCAACCAAGATCTCCGCGAAGAGTGCTACATCAAGGCATGGGTGCTAAGGTCAACAGGGAAGTAAGGAACGGTGGATCACGAGCACATAAGCGTCGTCGATTAGCAAGGCCTGAAGATTCTGATGACTCCATTCTTGTGGATGAGCTGGACCAAGGCCCTGCTATTCCATGGGGTCGAGGTGGCAGCAGATCTGCCCCACCTTGGCCTTTTGGAGGATTAGATGTGCATGGGACAACAGCTTGGGGATTAAACCTTGCTGCCTCAGGTTGGGGTCATCAGGGAGATGCTTTGGCTACCTTGACGACTGGGATCCAAACTGCTGGACCAAGCTCTAAGGGAGGGGCAGATACCCAACCCTTACAGGTTGATGATAGTGTCAGTTTTGATGATATAGGGGGGCTCTCTGAATACATCGATGCTCTGAAGGAAATGGTTTTCTTTCCATTGCTGTATCCTGATTTCTTTGCTAGTTATCATATCACTCCACCTAGGGGGGTATTGTTATGTGGCCCCCCTGGCACAGGGAAAACTTTGATTGCAAGAGCTTTGGCTTGTGCTGCTTCAAAAGCTGGCCAGAAGGTCAGCTTTTACATGCGAAAAGGAGCGGATGTGCTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAACTGAAACTGCTCTTTGAGGAAGCACAAAGGAACCAACCTTCTATTATATTCTTTGATGAAATAGACGGACTTGCGCCTGTGAGGTCTAGCAAGCAAGAGCAGATTCACAATTCCATTGTGTCCACGTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTCTTGATTGGAGCCACCAACAGGATTGATTCTATTGATGGAGCCTTGCGGCGTCCTGGTAGATTTGATCGTGAATTTAACTTTCCCTTGCCTGGTTGTGAGGCACGTGCTGAAATATTAGACATTCATACACGCAAGTGGAAACATCCTCCTTCGGAAGAACTAAAAAGGGAACTTGCAGCTAGTTGTGTAGGATATTGTGGTGCTGACCTAAAGGCCCTCTGTACTGAAGCTGCTATCCTAGCATTTCATCAAAAATATCCCCAGGTTTATACAAGTGATGACAAATTTCTCATAGATGTTGATTCAGTCAAGGTTGAAAAGTATCACTTCATTGAAGCAATGTCTACAATTACTCCTGCTGCTCATAGGGGCGCAATTGTGCACTCCAGGCCATTGTCTCTTGTGGTTCAACCATGTCTTCGTAGACATCTGGAGATAGTCATGAGTATTATATCTGATATTTTGCCTCCAGTTTCAGTTGGATCAGAATTGACTAAACTTTCAATGCTTTCCTGTGGATCTGCAATTCCACTTGTGTATCGACCTAGACTTATACTGTGTGGCAGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCTGTTCATTCATTAAGTCTTTCATCTCTTCTGTCTGATCCAAGTGCAAAGACACCAGAGGAGGCATTGGTTCATATATTTGGTGAAGCTAGGAGAACAACACCATCAATTCTCTATTTACCACAGTTTGATGTATGGTGGGAAACTGCACATGAACAACTCAGGGCTGTTCTCATAACTTTACTAGAAGAATTGCCATCTGACTTGCCTATCTTACTGCTTGGAACATCCTCAGTCCAGCTTGCTGACGTTGATGATGACCCTATTTCAGTTTTCCCTCGTCATTCAGTTTATCAAGTGAACATGCCATCAACCATAGATAGGACTTTGTTTTTCAATCATTTAGTAGAAGCTGTTTTGTCAGTCTTTTCGGAGGTAATGAGCAGGAAACCTCAGGGTGCAGGATGCCTTTCTGAACTTCCCAAGGCACCTAAACAGGCAATTGGCCCAAAGGTGTCCGAGCTTAAAGCAAAGGTAGAAGCCGAGCAACATGCACTTCGCAGATTGCGAATGTGTCTTAGAGATGTTTGTAACCGGATATTATATGACAAACGATTCAACGCCTTCCATTATCCAGTCTCAGATGAAGATGCTCCTAACTATTGCTCATTCATCCAGAACCCAATGGACATGGCCACCATGTTACAGCATGTTGATAATGGCCAGTATATTACGTGTTCTGCATTTCTGCAGGACATTGATCTTATTGTTTCCAATGCAAAGGCTTATAATGGAGAAGATTACAATGGCTCTCGGATAGTCAGTAGAGCTTGTGAACTCCGTGATGTGGTGCATGGGATGCTCTCACAGATGGATCCAGAACTAGTTGGATACTGTGACAAGATTGCAGCGCAAGGTGGCCCTGTTCATTTTTCTGATGAATCAGGGGGGTCTACATTCCCTGCTGCTCCTGTTTTACAGATGGGAACTGCCACTAGAACGAGTGCTCGACTTCGTAATGTCCAACCAGATGTTAATATGGATCAGAGCTATGAAGCATTGAAGCGGACTAAAAAGAGTTCTGATGTTTCTCATGGAGAAGACAAGTTGGGGCAAGATTCTTTGCCGTCTAAGACTTCCCAGAAGAATCAAGCCAATGACATAGCTTCCAAAAGGCTGGAACCGGCATCAATTGATGGAAATTTGCAAGGAAATTGTACAAGTGACCGTGTCATTTGCAGTGGTCTTGAAGATGGCACAATGTCGGATGGTGAATTTTCAACAAAAGTGGAGTCTGCCAAGCATCTTTTTGTTGAGCGTAGTGCCAATTACAGCATTCCGCAGCTTGAGAGGCTCTACACAAGAATCATGAAGGGCGTTATTGAAACCAAAGACAAAGGAACAAAAGATGATAGCAAGACTTCGGTTTTGAGTTTTTTGTTGAAATTTGTGAAGGATGATGCAAATTTCTGA 3576 0.4485 MCSKRSGQGNDPISGQVRTSDRIKVRSRTNLYGRPYFYYNPNILRNGKSKTKNRTAASRIAKMLRPENRHAQDLNANAGSGSLRRSTRKRRIVNLGDYTDSSGAEDEDLMKPAYKSLRNQIDNSVSQYEMMSSKRKRAVETRSTPRREGLRPRRLRAAVREQKILEPDDEQELSEEKVGQDETENGNDADDGQNEIEGDAEDEGEEDGDDEEGEEEQDGRRRYDLRNRADVRRFSTEVGKAQPRSPRRVLHQGMGAKVNREVRNGGSRAHKRRRLARPEDSDDSILVDELDQGPAIPWGRGGSRSAPPWPFGGLDVHGTTAWGLNLAASGWGHQGDALATLTTGIQTAGPSSKGGADTQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDSIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSEELKRELAASCVGYCGADLKALCTEAAILAFHQKYPQVYTSDDKFLIDVDSVKVEKYHFIEAMSTITPAAHRGAIVHSRPLSLVVQPCLRRHLEIVMSIISDILPPVSVGSELTKLSMLSCGSAIPLVYRPRLILCGSEGTGLDHLGPAVLHELEKFPVHSLSLSSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLITLLEELPSDLPILLLGTSSVQLADVDDDPISVFPRHSVYQVNMPSTIDRTLFFNHLVEAVLSVFSEVMSRKPQGAGCLSELPKAPKQAIGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVSDEDAPNYCSFIQNPMDMATMLQHVDNGQYITCSAFLQDIDLIVSNAKAYNGEDYNGSRIVSRACELRDVVHGMLSQMDPELVGYCDKIAAQGGPVHFSDESGGSTFPAAPVLQMGTATRTSARLRNVQPDVNMDQSYEALKRTKKSSDVSHGEDKLGQDSLPSKTSQKNQANDIASKRLEPASIDGNLQGNCTSDRVICSGLEDGTMSDGEFSTKVESAKHLFVERSANYSIPQLERLYTRIMKGVIETKDKGTKDDSKTSVLSFLLKFVKDDANF* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1815 1191 Pfam Bromodomain 900 968 IPR001487 GO:0005515
Dod10g1815 1191 MobiDBLite consensus disorder prediction 133 167 - -
Dod10g1815 1191 MobiDBLite consensus disorder prediction 1055 1102 - -
Dod10g1815 1191 CDD Bromo_AAA 887 997 - -
Dod10g1815 1191 MobiDBLite consensus disorder prediction 69 88 - -
Dod10g1815 1191 Pfam ATPase family associated with various cellular activities (AAA) 407 542 IPR003959 GO:0005524|GO:0016887
Dod10g1815 1191 PANTHER AAA DOMAIN-CONTAINING 1 1186 IPR045199 -
Dod10g1815 1191 MobiDBLite consensus disorder prediction 1074 1091 - -
Dod10g1815 1191 PRINTS Bromodomain signature 935 953 IPR001487 GO:0005515
Dod10g1815 1191 PRINTS Bromodomain signature 919 935 IPR001487 GO:0005515
Dod10g1815 1191 PRINTS Bromodomain signature 953 972 IPR001487 GO:0005515
Dod10g1815 1191 MobiDBLite consensus disorder prediction 1 17 - -
Dod10g1815 1191 ProSitePatterns AAA-protein family signature. 512 530 IPR003960 GO:0005524|GO:0016887
Dod10g1815 1191 MobiDBLite consensus disorder prediction 1055 1073 - -
Dod10g1815 1191 MobiDBLite consensus disorder prediction 215 237 - -
Dod10g1815 1191 MobiDBLite consensus disorder prediction 1 20 - -
Dod10g1815 1191 Gene3D - 879 1007 IPR036427 GO:0005515
Dod10g1815 1191 MobiDBLite consensus disorder prediction 128 287 - -
Dod10g1815 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 692 904 IPR027417 -
Dod10g1815 1191 SMART AAA_5 403 544 IPR003593 -
Dod10g1815 1191 ProSiteProfiles Bromodomain profile. 910 972 IPR001487 GO:0005515
Dod10g1815 1191 Gene3D - 543 628 - -
Dod10g1815 1191 Pfam AAA+ lid domain 570 606 IPR041569 -
Dod10g1815 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 632 IPR027417 -
Dod10g1815 1191 Gene3D - 685 836 IPR027417 -
Dod10g1815 1191 SUPERFAMILY Bromodomain 885 997 IPR036427 GO:0005515
Dod10g1815 1191 CDD AAA 403 542 - -
Dod10g1815 1191 PANTHER BNAC08G44480D PROTEIN 1 1186 - -
Dod10g1815 1191 MobiDBLite consensus disorder prediction 185 214 - -
Dod10g1815 1191 Gene3D - 365 635 IPR027417 -
Dod10g1815 1191 SMART bromo_6 887 994 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1815 Dod-Chr10 39643424 39651080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1815 353 607 Calmodulin-binding Proteins AT3G56690 36.680 3.28e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1815 K22531 - gmx:100787765 1856.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1815 10 39643424 39651080 Dod10g1815 10 39643424 39651080 ECH