Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1791 ATGGAGAAGAACAGAGCTAGAGGAAGAGGCAAAGCAAAGGAGCAGACAGGACATAGCGACCGGCAAATTCTTGGAGACATCGGTAATCTGGAGGTGGCTAGAAATGCCGAAGGAAAGCACATTTCACGGCCCATTACAAGGAACTACCATGCAAAACTGTTAGCAAATGCACAAATATCAGCAAATGTGGTACTGGCTTTAGAAGCCCAAGCAAATGAGCAAGGAACTGTACAAGGGAACAAAAACTTTATTCAACCTGCATTAGACAACACAGCAATTGTTTATAAGAAACGTGGTGTAGAAGAAACTGTTTATTTTGATTGTGAAAGGAAGTTTAGGGCAAAATCCTGTATGAAGGTCAAGACTCTGACTGCAGAAATCACTGCACAGAGCAAGGCTGCTTGTGGAGCTTTGACTGAGCCTAAGGACCAGCATGTTGATAGTGATTCAGATGGTGCTAATGATGAGTTGGCAGTAGCTGAATATCTTGATGATCTATACGAATTCTATAAGCAAACAGAAGTTGAGAGCCAGATTCCAGATTACATGAACTCACAGCATGAAATTAATGAGAAGATGAGGTCTATTACGGTGGATTGGCTGGTTGATGTTCACTGGCGATTTAAATTAATGCCTGAGACGCTTTATCTTGCCATGAATATACTTGATCGATATCTCTCATCGACAGATATACCAAAAACAGAATTACAGCTGGTGGGCATAAGCTCAATGCTCATAGCTTGCAAATATGAAGAGATATTTCCTCCTCAGGTTAAGGTCCTTGCTAAAATATCAGATGGTGCTTACACCAAAGATCAGATTGTTTTCATGGAGAATGCAATCCTTGAAAAGTTACAATGGTATTTGACAGTTCCCACACCCTATGTCTTTTTAGTACGATTCATCAGAGCTTCTGAGCAGCCAGATCATGAGGATACTATGCGGCTGGAGAACATAGTCTTTTTCTTGGCTGAACTTGGTCTTGTACACTATCAAACCGTTTTGTGCCACCCTTCGGTGATAGCTGCAGCAGCCGTCTATGCTGCTCGTTGTACACTCAATAGAAGTCCATTCTGGACTGAAATTTTGAAGCGTAAGACAGGCTACACCACAGAACAGATAATATATTGTGCCAAGCTCTTAATCAGCTTACAATCAAGTGGTGCAGATAGTAAATTCAATGTAGTGTTCAAGAAATACTCAGGTCCAGACAGAGGGGGTGTTGCTCTCTTACCTCCACCTAAACATGTACTCAACAATTTCTAA 1266 0.4147 MEKNRARGRGKAKEQTGHSDRQILGDIGNLEVARNAEGKHISRPITRNYHAKLLANAQISANVVLALEAQANEQGTVQGNKNFIQPALDNTAIVYKKRGVEETVYFDCERKFRAKSCMKVKTLTAEITAQSKAACGALTEPKDQHVDSDSDGANDELAVAEYLDDLYEFYKQTEVESQIPDYMNSQHEINEKMRSITVDWLVDVHWRFKLMPETLYLAMNILDRYLSSTDIPKTELQLVGISSMLIACKYEEIFPPQVKVLAKISDGAYTKDQIVFMENAILEKLQWYLTVPTPYVFLVRFIRASEQPDHEDTMRLENIVFFLAELGLVHYQTVLCHPSVIAAAAVYAARCTLNRSPFWTEILKRKTGYTTEQIIYCAKLLISLQSSGADSKFNVVFKKYSGPDRGGVALLPPPKHVLNNF* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1791 421 SMART cyclin_7 296 383 IPR013763 -
Dod10g1791 421 SMART cyclin_7 199 283 IPR013763 -
Dod10g1791 421 Pfam Cyclin, N-terminal domain 165 289 IPR006671 -
Dod10g1791 421 PIRSF Cyclin_A_B_D_E 1 420 IPR039361 -
Dod10g1791 421 MobiDBLite consensus disorder prediction 1 20 - -
Dod10g1791 421 PANTHER CYCLIN-B1-4 16 415 - -
Dod10g1791 421 CDD CYCLIN 290 381 IPR013763 -
Dod10g1791 421 MobiDBLite consensus disorder prediction 1 23 - -
Dod10g1791 421 PANTHER CYCLINS 16 415 IPR039361 -
Dod10g1791 421 SUPERFAMILY Cyclin-like 291 416 IPR036915 -
Dod10g1791 421 Gene3D - 179 283 - -
Dod10g1791 421 CDD CYCLIN 193 282 IPR013763 -
Dod10g1791 421 Pfam Cyclin, C-terminal domain 292 413 IPR004367 -
Dod10g1791 421 Gene3D - 284 420 - -
Dod10g1791 421 SUPERFAMILY Cyclin-like 154 287 IPR036915 -
Dod10g1791 421 SMART Cyclin_C_2 292 414 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1791 Dod-Chr10 39083150 39086847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1791 8 412 Core Cell Cycle Gene Families AT2G26760 43.902 3.28e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1791 K21777 - jre:109013760 407.527