Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1784 ATGGATTCAGCAGCTCCATCATCACCGGACCTCGACCTCGACAAGCTCAAAGCAGTCAAAGTCCTGGGCAGAGGCGCCATGGGCACCGTCTTCCTTGTCCAACACAACACCACCACCACCACCCCCAAACAACAACTTGCACTCAAGGTGGTCGACAAGTCCTCCGCCACCGCAAAAGCCGACGCCGACCGCCGCGCCCGCTGGGAAGTCACTGTCCTCTCCCGCCTCTCCCACCCTTTCCTCCCATCCCTCCTCGGTACCTTCGAAACCGACAACTTATTGGGCTGGGCCGTCCCTTACTGCCCCGGCGGCGACCTCAACGTCCTCCGCCACCGCCAAACCGACCACGTCTTCTCCCCCGCCGTGATCCGCTTCTACGTCGCTGAGATCCTCTGCGCCCTCGACCACCTCCACTCCATGGGCATCGCCTACCGCGACTTAAAGCCCGAAAACGTCCTCATCCAACAAACCGGCCACGTCACCCTAACCGACTTCGACCTCTCCCGCAAACTCACTCCCAAAACCGTTATAACCGCCTCAACAACCCTCACCGATCCCGACGCGCGGCGAAAACACGACACGTGTCATCATCAGAGCAAGAAGGGACTTAAGAAGGCCAAGTCCGCGCGAGTCAGCCCGGTGAGTCGCCGAAAGCCGAGTTTCGCGGCCGGTGAGCGATCCAACTCGTTCGTCGGCACGGAGGAGTACGTGGCGCCGGAGGTGGTGCGCGGTGACGGTCACGAGTTCGCCGTGGACTGGTGGGCGCTCGGGGTGCTTACTTACGAGATGCTGTACGGTACGACGCCGTTTAAGGGGAAAAACAGGAAAGAAACGTTTCGGAACGTGTTGATGAAGGCGCCGGAGTTTGTTGGGAAGCAAACGGCGTTGACGGACCTGATTTCGCGGTTGCTTGAAAAGGAACCTTCTAGAAGGTTGGGTTACGTAAGGGGCGCGAGCGAGATCAAGGAGCACGAGTTCTTCAGAGGGGTGAGATGGGACCTGCTGACGGAGGTGGTGAGGCCGCCGTTCATTCCGTCTGGAGACGACGGTGACTTGACGGAGAAGCTGGGTCGTTGCGGTGGCGAAATGGACGTTAGGGATTACTTCGAGAGATTGAAAGCGCCGCAGTCGTTGCCACCTTCGCCGTTACCGTCACCGTCTTGTGAGTTTCAGAGGAATGTTTCGTTGGCAGAATTCTGA 1200 0.5917 MDSAAPSSPDLDLDKLKAVKVLGRGAMGTVFLVQHNTTTTTPKQQLALKVVDKSSATAKADADRRARWEVTVLSRLSHPFLPSLLGTFETDNLLGWAVPYCPGGDLNVLRHRQTDHVFSPAVIRFYVAEILCALDHLHSMGIAYRDLKPENVLIQQTGHVTLTDFDLSRKLTPKTVITASTTLTDPDARRKHDTCHHQSKKGLKKAKSARVSPVSRRKPSFAAGERSNSFVGTEEYVAPEVVRGDGHEFAVDWWALGVLTYEMLYGTTPFKGKNRKETFRNVLMKAPEFVGKQTALTDLISRLLEKEPSRRLGYVRGASEIKEHEFFRGVRWDLLTEVVRPPFIPSGDDGDLTEKLGRCGGEMDVRDYFERLKAPQSLPPSPLPSPSCEFQRNVSLAEF* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1784 399 Gene3D Transferase(Phosphotransferase) domain 1 105 175 - -
Dod10g1784 399 Gene3D Transferase(Phosphotransferase) domain 1 225 346 - -
Dod10g1784 399 PANTHER FLIPPASE KINASE 1-RELATED 11 377 - -
Dod10g1784 399 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Dod10g1784 399 ProSiteProfiles Protein kinase domain profile. 16 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1784 399 MobiDBLite consensus disorder prediction 187 226 - -
Dod10g1784 399 SMART serkin_6 16 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1784 399 MobiDBLite consensus disorder prediction 194 212 - -
Dod10g1784 399 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 11 377 - -
Dod10g1784 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Dod10g1784 399 SUPERFAMILY Protein kinase-like (PK-like) 14 349 IPR011009 -
Dod10g1784 399 Pfam Protein kinase domain 224 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1784 399 Pfam Protein kinase domain 18 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1784 399 Gene3D Phosphorylase Kinase; domain 1 16 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1784 Dod-Chr10 38981810 38983402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1784 11 399 AGC Kinase Gene Family AT3G20830 61.481 4.36e-167 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod10g1784 Pkinase 1.7e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1784 10 38981810 38983402 Dod10g1784 10 38981810 38983402 ECH
Dod10g1784 10 38981810 38983402 Dod03g3006 03 62368104 62369723 PCT