Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1783 ATGGGCTCAATGAACTCAAACAACTGGCTTTCCTTCCCCCTTTCTCCAACCCATTCTTCCATTCCAGCTCATCTCCAAGCAACACAGTCTCACCAGTTTTCTCTTGGGACATTAGTGAACGAGAACATGGAAAGCTCTTTTCAAAATCACGATTGGAATCTGCTAAATGCTCACAGCAGCAACGAGGTTCCGAAGGTTGCAGATTTTCTTGGTGTGAGCAAGGCCGAGAATCAGTCAGATCTTGCAGCCTTCAATGAAATTCAGTCAAATCATCATCATGATTCGGATTACCTCTTCACCAACAATAGCCTCATGCCTGTGCAAAACTCGGTGGTGGCTACTTCTAGCAATAACTATGAGTACCAAGAAAACAATAATGCTAACAATAACCTGCAGTCATTGACGTTATCCATGGGAAGTGGTAGTGGTAACAAGGAATCAACATGCGAGACCAGCGGCGACAATAGTACCAGCAATATTGTTGAAGCTGCTGCTCCTAGAAGAACTTTGGATACCTTTGGGCAAAGAACATCAATATATCGCGGTGTAACAAGACATAGATGGACGGGAAGGTATGAAGCTCACCTTTGGGATAACAGCTGTAGAAGGGAAGGACAATCAAGAAAAGGTCGCCAAGTCTATTTGGGTGGCTATGACAAAGAAGAGAAAGCAGCGAGGGCATATGATTTAGCTGCACTAAAGTACTGGGGGACATCTACCACTACCAACTTCCCCATAAGTAACTACGAGAAAGAGTTGGAAGAAATGAAGCACATGACTAGACAGGAATTCGTGGCCGCCATAAGAAGAAAGAGCAGTGGATTCTCGAGGGGTGCATCAATGTATCGCGGAGTCACAAGGCATCACCAACACGGAAGATGGCAAGCAAGGATTGGCAGGGTCGCTGGAAACAAAGATCTTTACTTGGGAACTTTCAGCACCGAGGAAGAGGCTGCAGAAGCTTACGACATAGCAGCGATAAAGTTTAGAGGCCTTAACGCAGTGACCAACTTCGACATGAGTCGCTACGATGTCAAAGCCATTCTCGAAAGCAACACTCTCCCCATAGGAGGAGGCGCTGCAAAGCGGCTAAAGGAGGCTCAGGCTCTGGAATCTTCTAGAAAAAGGGAAGAGATGATAGCGTTGGGATCAACCTTCCAATACGGAAGCTCGTCCAGCACAAGCAGGCTACAAGGTTACCCTCTAATGCTGCAGCATCATCATCATCAGTTCGATCAAACACCACAACCTTTGTTAACCCTACAGAACCAGGACATGTCACAATACAGTACTACTACTACTCAAGACCCTTCTTCGTTTCATCAGAGTTACATCCAAACGCAGCTTCAGTTGCACCACCAGCAAAGTGGTTCATACATGCAGCACCAAACGGCTCATAACAACAACAACGGTCAATTCTACAACAGCTACCTTCAGAACCACCCGGCCTTGCTTCAAGGGTTGATCAACATGGGGTCTTCTTCTTCATCAGTGATGGAGAATAACAGTGGAGGAGGGTATATTGGGAATAATAGTAATAATAATAGTGGTATTGGGATTGGAATGGCTTCGAATAATTCTTCATCAGCTGCATCAGCGGAGGAGTTAGCGCTTGTTAAGGTTGATTATGAGATGCCTTCCGGGGGATATGGCGGCTGGTCGGCGGCGGACTCCATGCATGCTTCAAATGCTGCCGGTGTCTTCACAATGTGGAATGAATAA 1722 0.4611 MGSMNSNNWLSFPLSPTHSSIPAHLQATQSHQFSLGTLVNENMESSFQNHDWNLLNAHSSNEVPKVADFLGVSKAENQSDLAAFNEIQSNHHHDSDYLFTNNSLMPVQNSVVATSSNNYEYQENNNANNNLQSLTLSMGSGSGNKESTCETSGDNSTSNIVEAAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREEMIALGSTFQYGSSSSTSRLQGYPLMLQHHHHQFDQTPQPLLTLQNQDMSQYSTTTTQDPSSFHQSYIQTQLQLHHQQSGSYMQHQTAHNNNNGQFYNSYLQNHPALLQGLINMGSSSSSVMENNSGGGYIGNNSNNNSGIGIGMASNNSSSAASAEELALVKVDYEMPSGGYGGWSAADSMHASNAAGVFTMWNE* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1783 573 ProSiteProfiles AP2/ERF domain profile. 179 245 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 Pfam AP2 domain 179 237 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 Pfam AP2 domain 282 331 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 CDD AP2 178 247 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 Gene3D AP2/ERF domain 281 341 IPR036955 GO:0003700|GO:0006355
Dod10g1783 573 Gene3D AP2/ERF domain 179 247 IPR036955 GO:0003700|GO:0006355
Dod10g1783 573 PRINTS Ethylene responsive element binding protein signature 180 191 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 PRINTS Ethylene responsive element binding protein signature 321 341 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 ProSiteProfiles AP2/ERF domain profile. 281 339 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 CDD AP2 280 341 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 SUPERFAMILY DNA-binding domain 280 341 IPR016177 GO:0003677
Dod10g1783 573 SUPERFAMILY DNA-binding domain 178 247 IPR016177 GO:0003677
Dod10g1783 573 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 572 - -
Dod10g1783 573 SMART rav1_2 281 345 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 SMART rav1_2 179 251 IPR001471 GO:0003700|GO:0006355
Dod10g1783 573 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 7 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1783 Dod-Chr10 38962341 38965887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1783 4 573 AP2-EREBP Transcription Factor Family AT1G51190 63.993 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dod10g1783 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1783 K09285 - gmx:100788471 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1783 10 38962341 38965887 Dod10g1783 10 38962341 38965887 ECH