Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1771 ATGGCTGCAACTCCCTCAAAGCTCAATCTCCTATCCAAATTCAATCCCAAACCTTCCCCAGCCGTTACCCCTCAAACCCCGCAGTCCCTTCCACCTCCATGCAGATCCACGCGCCAATGGTCCCTCTCCTTCAACTCCGTCAATCCCGCGAAGCACCCTCGATCAATCGATGATATCGATGATTCCCCCGAAGACAAAGTGGTAACACGTAGAACCGTAAATAGACGAAATTTGTCTGTTGCTGAAGGTGGATCTGGAAAAAAAGGTGAATCACTGAAGCAGAGAAATGAAAAATGTTCGGTTGAAGTTCCGTTTGCTCCTCAATCCCCTGACCAATCTGAAACGAAGAAGAGGAAGACGTGCAGTGAGGGTGCAAGGACAGTTGTTACCAGAGCCATTTCGGCGAAGAAAGCGAAACTTGGGAGTGGTCGAAAGGGTACAAGTTTCAAACGTCTTGCTGATATTGACAATGAACAAGGGGAGATAACTACATTCATTAAAGGTTCTATTTGTGACGATCAATGTCTGGGCCGTTGCCCCTACATTCATGGTGTTCCAGGAACTGGCAAGACAATGAGTGTACTATCAGTAATGAGGAGTTTGAGGTCAGAAGTTGAAGCAGGAAACATCAGACCCTACTATTTTGTGGAGATTAATGGTCTGAAATTGGCGTCACCAGAGAATATTTATAGGGTCATATATGAGGCATTAAACGGACACAGGGTCAGCTGGAAAAAGGCTCTGCATCTGCTAAATGAGAGATTTGTAGAAGGGAAGAAAACTGGGGAAGAGGCTGACCGGCCATGTATTTTGCTTATTGATAAGCTTGATCTTCTTGTAACCAGAAACCAGTCGGTACTATACAACATTCTTTATTGGCCTACAAGGGCACATTCCAAACTTATTGTGATAGGGATAGCAAATACGATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGCCGAATGGGCATACAGAGGCTTTGCTTTGGCCCATATAATTATCAGCAGCTTCAAGAAATCATTTTGAGCCGCCTTAAAGGAATTGATGTATTTGAAAAGCAAGCCATAGAATTTGCTTCAAGAAAGGTCGCAGCAATCTCAGGAGATACACGTCGTGCCTTGGAGATATGCAGACGTGCAGCTGAAATAGCAGATTATCGTATGAAGAAGCTAATTTTAAATCCTGATTCTGTTGCAACAGGAAAAGCACTTGTTGGTATGGCTGATGTTGAAGCAGCCATTCAAGAAATATTCCAGGCACCTCATATTCAAGTGATAAAAAGTTGTTCCAGATTTAGCAAAATCTTCCTGACAGCTATGGTGCATGAGCTTTATAAAACAGGAATGGGGGAAACCACTTTTGAGAAGTTGGCGATGACAGTTTCGTGTCTCTGTACAAGTAACGGTGAAGTGTTTCCAGGATATGATATTCTTCTGCAAGTTGGCTGTAAGCTAGGCGAATGCAGGGTTATTTTATGTGAAGCAGGTGCCAAGCACAAGCTGCAAAAATTGCAGCTCAATTTCCCGAGCGATGATGTAGCCTTTGCGCTAAGAGACTGCAAAGATCTTCCTTGGCTGTCGAAGTATTTAACATAG 1602 0.437 MAATPSKLNLLSKFNPKPSPAVTPQTPQSLPPPCRSTRQWSLSFNSVNPAKHPRSIDDIDDSPEDKVVTRRTVNRRNLSVAEGGSGKKGESLKQRNEKCSVEVPFAPQSPDQSETKKRKTCSEGARTVVTRAISAKKAKLGSGRKGTSFKRLADIDNEQGEITTFIKGSICDDQCLGRCPYIHGVPGTGKTMSVLSVMRSLRSEVEAGNIRPYYFVEINGLKLASPENIYRVIYEALNGHRVSWKKALHLLNERFVEGKKTGEEADRPCILLIDKLDLLVTRNQSVLYNILYWPTRAHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIILSRLKGIDVFEKQAIEFASRKVAAISGDTRRALEICRRAAEIADYRMKKLILNPDSVATGKALVGMADVEAAIQEIFQAPHIQVIKSCSRFSKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCTSNGEVFPGYDILLQVGCKLGECRVILCEAGAKHKLQKLQLNFPSDDVAFALRDCKDLPWLSKYLT* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1771 533 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 76 528 IPR020793 -
Dod10g1771 533 MobiDBLite consensus disorder prediction 1 19 - -
Dod10g1771 533 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 76 528 - -
Dod10g1771 533 Pfam ATPase family associated with various cellular activities (AAA) 181 326 IPR003959 GO:0005524|GO:0016887
Dod10g1771 533 Gene3D - 137 332 IPR027417 -
Dod10g1771 533 MobiDBLite consensus disorder prediction 53 72 - -
Dod10g1771 533 Gene3D - 333 420 - -
Dod10g1771 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 396 IPR027417 -
Dod10g1771 533 SMART AAA_5 176 330 IPR003593 -
Dod10g1771 533 MobiDBLite consensus disorder prediction 32 50 - -
Dod10g1771 533 MobiDBLite consensus disorder prediction 1 96 - -
Dod10g1771 533 Pfam AAA lid domain 354 387 IPR041083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1771 Dod-Chr10 38856114 38862005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1771 158 532 Core DNA Replication Machinery Family AT4G14700 76.000 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1771 K02603 - gmx:100798547 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1771 10 38856114 38862005 Dod10g1771 10 38856114 38862005 ECH