Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1765 ATGGGAACTTGTTGCAGCAAGCTCTGCGTATGCTGGTGGCCCTGCAATAACAGATCAAAAAATCTTCAGGACTTGCCTGAAAATGAGGATGGGAACAAGGGTGAGAAGAAGGGTACTAGTTCCAGCTTCACTGAGTTCACCTTGGATCAACTGAAAAGTGCCACGTCAGCATTCTCGCCGGACAACATTGTCTCGGAACATGGTGAGAAGGCTCCGAACGTTGTCTACAAAGGGAGGCTCGAAGATGATACTCTTGTTGCTGTGAAGCGCTTCAACAAGAACGCTTGGCCTGATTCAAGACAGTTCCTAGAGGAAGCACGGACAGTGGGGCAGCTGAGGAATGAGCGTTTAGCTAACTTGGTTGGGTGTTGCTGTGACGGAGAGGAAAGGTTGCTTGTGGCAGAGTTTATGCCAAATGAAACTCTTTCCAAACATCTTTTCCACTGGGAGACCCAGCCCATGAAATGGGCAATGAGGCTGAGAGTTGCCTTGTATTTGGCACAAGCATTGGAATACTGCAGCAGTCAAGGGAGGGCATTGTACCATGATCTTAATGCTTATAGAGTTTTGTTTGATCAGGATGGCAACCCTAGACTCTCATGTTTTGGACTCATGAAAAACAGCAGAGATGGCAAAAGCTACAGTACCAATTTAGCCTTCACCCCTCCGGAGTATATGAGGACAGGAAGAATCGTTCCAGAAAGCGTAATTTACAGTTTTGGCACCCTTCTGCTTGATCTTCTGAGTGGCAAGCATATTCCGCCAAGTCATGCGCTTGACCTTATACGGGGCAAAAATTTTTCATTGCTGATGGACTCGTGTTTGGAAGGTCAACTTTCCAATGATGACGGCACTGAAATAGTGAGATTAGCTTCGCGTTGTTTGCAGTATGAACTTCGGGAGAGGCCAACAGCCAAGTCACTTGTGACTGCTTTAACTCCTCTTCAGAAAGAAACTTCAGTACCATCGCAAGTTTTGATGGGAATACCAGAAGAAGGTGCATCATCAAAGGAAACAGTTTCATTGACACCTTTTGGTGAAGTTTGTTCAAGAAGAGATCTCACTGCAATATTTGAAATTTTGGAAACAGCAGAGTACAAGGATGATGAAGATGTTGCAAATGAGCTTTCCTTCCAAATGTGGACAGATCAAATACAAGAAACACTAAATGCTAAGAAGCGTGGAGATTCTGCTTTTCATGCCAAAGACTTCTCTTCAGCCATTGACTACTATACACAATTCATCGATGGCGGGACCATGGTATCGCCAACTGTGTATGCAAGGCGCTGCTTATGTTACCTGATGAACAACATGCCACAAGAAGCCCTTGGAGATGCCATGCAAGCTCAATCAGTCTCCCCCACCTGGCCTACTGCATTCTATCTTCAAGCAGTGGCACTCTTCAGCCTTGGGATGGACAATGATGCACAGGAAAGCCTTAAAGACGGCACAATGCTGGAATCAAGAAGGCACAGAAATTGA 1482 0.4561 MGTCCSKLCVCWWPCNNRSKNLQDLPENEDGNKGEKKGTSSSFTEFTLDQLKSATSAFSPDNIVSEHGEKAPNVVYKGRLEDDTLVAVKRFNKNAWPDSRQFLEEARTVGQLRNERLANLVGCCCDGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVALYLAQALEYCSSQGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYMRTGRIVPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFSLLMDSCLEGQLSNDDGTEIVRLASRCLQYELRERPTAKSLVTALTPLQKETSVPSQVLMGIPEEGASSKETVSLTPFGEVCSRRDLTAIFEILETAEYKDDEDVANELSFQMWTDQIQETLNAKKRGDSAFHAKDFSSAIDYYTQFIDGGTMVSPTVYARRCLCYLMNNMPQEALGDAMQAQSVSPTWPTAFYLQAVALFSLGMDNDAQESLKDGTMLESRRHRN* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1765 493 ProSiteProfiles Protein kinase domain profile. 61 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g1765 493 SUPERFAMILY TPR-like 391 482 IPR011990 GO:0005515
Dod10g1765 493 Gene3D Tetratricopeptide repeat domain 386 492 IPR011990 GO:0005515
Dod10g1765 493 Gene3D Transferase(Phosphotransferase) domain 1 138 330 - -
Dod10g1765 493 SUPERFAMILY Protein kinase-like (PK-like) 39 319 IPR011009 -
Dod10g1765 493 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Dod10g1765 493 Pfam Protein tyrosine and serine/threonine kinase 74 312 IPR001245 GO:0004672|GO:0006468
Dod10g1765 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 493 IPR045845 GO:0004672|GO:0009742
Dod10g1765 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1765 Dod-Chr10 38748384 38753830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1765 16 312 Glycoside Hydrolase AT3G07070 31.707 8.30e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dod10g1765 PK_Tyr_Ser-Thr 2.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1765 - - gmx:100804210 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1765 10 38748384 38753830 Dod10g1765 10 38748384 38753830 ECH