Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1750 ATGGGAGAAGAGGTTAAGATCGCCGACTACCAAGGCGGGAGAGGTGGTGGTGGTGGCGACGACGAGCGCGTCGCCGAGTGGGAGTTCGGCCTCCCCATCGCCGAAGACCTCCTGCCGCTCTCTCAGCCGCTGATCCCGCCGGAGCTTGCCTCCGCCTTCAGCATCTCGCCGGAGCCCTACCGGACGCTAATAGACGTCAGCCGCGCCTCGCACGACACCATCTCCGCCATCCGTGGCGGCTCCTCACAGGCCTTCTCCTCCAGCAATTTCAATCACGACGACCCCGCCACCGTGCTGGAGCCCGACGCCGCCGCAGAAGCCGCCGACGATGATCCCGATCGAGACGGCTCCGGCTACGATTCCAGGAAGCTCCGGAAGATCGACGGCGCCGCGGAGGAGGCCGATTCGGCTGCTCCGCCGGCGGACGATCCGTCTGCGCGGGCGCTGAAGCGGCCGCGCCTCGTGTGGACTCCGCAGCTTCACAAGCGGTTCGTCGACGTGGTGGCGCACCTCGGAATCAAGAACGCGGTGCCGAAGACGATTATGCAGCTGATGAACGTCGAAGGATTGACTCGCGAGAACGTCGCGAGCCATCTCCAGAAGTATCGTCTCTACTTGAAGCGAATGCAAGGCTTGTCCAACGAAGGTCCTTCCTCATCGGACCGGTTGTTCGCGTCCACGCCTGTGCCGCAGAGCTTGCACGAGTCCGCCGGCGGCGGCGGAAGCGCAGGACACTCGCAGGGAAACGGACACCTCACGGTTCCGATTCCGATGCCGTATCCGCCGCCGACGGCGATGATGCCAATGCCGGTGCTCGGGATGCCTCCGATGGGGATGGCCGTCGGGAACCACCACGGTTTCAACCCGCAACGGGATTGGTCCGGTGCGAATAAGTACGGTTCGGTTGTTTCGTACCCTCACACTCACAGTCACAGCGTTACTCCTAGTGATAAGTGA 957 0.6374 MGEEVKIADYQGGRGGGGGDDERVAEWEFGLPIAEDLLPLSQPLIPPELASAFSISPEPYRTLIDVSRASHDTISAIRGGSSQAFSSSNFNHDDPATVLEPDAAAEAADDDPDRDGSGYDSRKLRKIDGAAEEADSAAPPADDPSARALKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDRLFASTPVPQSLHESAGGGGSAGHSQGNGHLTVPIPMPYPPPTAMMPMPVLGMPPMGMAVGNHHGFNPQRDWSGANKYGSVVSYPHTHSHSVTPSDK* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1750 318 MobiDBLite consensus disorder prediction 213 255 - -
Dod10g1750 318 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 152 204 IPR006447 GO:0003677
Dod10g1750 318 SUPERFAMILY Homeodomain-like 149 208 IPR009057 -
Dod10g1750 318 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 317 IPR044841 GO:0003700|GO:0006355
Dod10g1750 318 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 317 - -
Dod10g1750 318 Pfam Myb-like DNA-binding domain 155 203 IPR001005 -
Dod10g1750 318 MobiDBLite consensus disorder prediction 1 23 - -
Dod10g1750 318 MobiDBLite consensus disorder prediction 213 233 - -
Dod10g1750 318 Gene3D - 148 210 - -
Dod10g1750 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 207 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1750 Dod-Chr10 38647371 38650086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1750 1 285 G2-like Transcription Factor Family AT3G46640 57.143 6.02e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod10g1750 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1750 - - zju:107411020 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1750 10 38647371 38650086 Dod10g1750 10 38647371 38650086 ECH