Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1746 ATGAGCTTCGTTTTCAGAGGTAGTAGGGGAGATATTGAAAGCGGGTTTACAGAATATGTTCCTGAAAGATCCTCAATGCGTGTTCATCCAGCTCGGCCTGTTAATAGCAATTCTCTGGCTTTTCTTACTACAGTTATTGTGCTATTCATGCTGTTGAACTCTCCTCAGATGACACATTATTTTATGCTATGGCTTGTGCTTGCGGTCTTTGCAATGGCTACTAGCTTGAGGATGTATGCAGCTTGTCAACATCTTCAAGCTCATGCCAGGGCTCATGCTGCAGCAGCCACTGGGTTGCTTGGCCATACTGAATTACGACTTCACATGCCACCCTCCATAGCAATTGCAACTAGAGGACGATTGCAGGGACTTAGACTCCAGCTTGCACTTCTTGATCGTGACTTTGATGAGCTAGATTATGATGCTTTGAGAGCTCTAGACTCTGATACTGCTTCTAGTACTACTTCAATGACTGAGGAAGAGATAAATGCCTTGCCTGTCCACACGTATAAAGTTGCAGTTCCAACAAAGGATGGCTCAGCAGGTTTGGGATCGTCTTCAGGTGCAGCTGAGAATAAACAAGACTCTGAAGGAGCAGAGGGAAATCTCCCATGTCCAGAAGATGAGCTTACGTGTACCATATGCTTGGAACAAGTTAACAGGGGGGAGCTTGTTCGTACCCTGCCATGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCCGGCAGCAAGGAACATGTCCGGTGTGTAAATTTAAGATGGGGTCTGAATTTCAGGGTAGCAGGGAGAGCGACTCCGAGGGTTCAGATATTGTGTAG 825 0.463 MSFVFRGSRGDIESGFTEYVPERSSMRVHPARPVNSNSLAFLTTVIVLFMLLNSPQMTHYFMLWLVLAVFAMATSLRMYAACQHLQAHARAHAAAATGLLGHTELRLHMPPSIAIATRGRLQGLRLQLALLDRDFDELDYDALRALDSDTASSTTSMTEEEINALPVHTYKVAVPTKDGSAGLGSSSGAAENKQDSEGAEGNLPCPEDELTCTICLEQVNRGELVRTLPCLHQFHANCIDPWLRQQGTCPVCKFKMGSEFQGSRESDSEGSDIV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1746 274 SMART ring_2 212 252 IPR001841 -
Dod10g1746 274 MobiDBLite consensus disorder prediction 176 203 - -
Dod10g1746 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 259 IPR013083 -
Dod10g1746 274 Pfam Ring finger domain 211 253 IPR001841 -
Dod10g1746 274 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 274 - -
Dod10g1746 274 CDD RING-H2_PA-TM-RING 211 253 - -
Dod10g1746 274 SUPERFAMILY RING/U-box 207 257 - -
Dod10g1746 274 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Dod10g1746 274 PANTHER TARGET OF ERK KINASE MPK-1 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1746 Dod-Chr10 38573387 38579291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1746 1 274 C3H Transcription Factor Family AT3G55530 69.784 1.52e-125 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1746 K16283 - gmx:100805406 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1746 10 38573387 38579291 Dod10g1746 10 38573387 38579291 ECH