Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1737 ATGCTTTCTGCAAACCCCCTTGTGGAAAATTTTCCTGGTCATGTCTCAGTATTTCCAAATCAGGACCCAGAAATGAATGGTTTTAATTATGAGGATTCATCTTCCCCTTCTTCTGGCATAAGCTCAAGTGGAGATTCAACGGAGGTGACTAAATATTCCAACCCCATCCTCGGATACATAAGCGACATCCTCATGGATGAGGAAGATGACTTGGAGAACAAACCCTGCATGTTGCAGGAGTGTTTGAGGCTCCAAGCTGCTGAAAAATCATTCTATGATGTGCTTGGTCGCAGCTATCCTTCATCACCCTCTCAGGTACGTGGTTGTTTCCCTGATGAAAACAACCCAGATGGTGATTTTGGCCGCAGTACAAGTTTTGAGAGCTATAGCACCTGCACCACTGATAACTCATATGAGTCTGATTGGGTTAATGTTGTGGGTGAATATGAATCTTCTTTGCAACAAGCCCCTCTTGCTGATTCCCCACATGATCCATTCAGGGAGTACTCACAAGCTGCTGTACTTTTTCACAATGGAACCATTCAGTCCCAGAGCATGCCACTGATGAATGGAGAGGATTCAAGCGCAGCAGCAACGACAGGATCAAGGGAAAAGAGAAGCTATCAGATGGATGACACTTCCCATGAACAAGGTGGAAGAGGGAGCAAGGTTTCAGCTGTCTTTTCTGACGATTCAGAGCCGCCAGAGATCCTTGATGAGGTGCTGCGTGTCCAGATTGGAAGAAGTCAACATTGTGGCGGGATTGAACCATCAGATAAGGGCATTCTGAGGCCGAATGTTGACTCAGGAGGATCCAGTGGAAAGGCAACACGTCCAAAGAAAGTTACCAACACGGCTACAGCTGTAGATTTGTGGACTCTTCTAACTCAATGTGCACAGGCAGTGGCAAACTATGACCAAAGGAATGCAAATGAGATACTCAAGCAGATTAGGCAGCACTCTTCACCATATGGGGATGGACTCCAGCGCATGGCTCATTATTTTGCCAATGGCCTTGAGACAAGATTGGCTGCTGGGACACCATCATATGTGCCCCTTGAAGTGGCAACTGCTGCTGATATGTTGAAAGCTTACAAACTCTATGTCACGGCTTCACCTTTGCAGAGGCTGTCAAATTCATTGGCAACCAAAACAATCATGAAGCTAGTGCAAAATGAAAGCAGTGTTCACATTATTGACTTTGGCATTTGCTATGGTTTCCAGTGGCCCTGCCTGATCAAACACTTGTCGGAGAGACATGGGGCGATAAAGCTTCGAATAACAGCAGTCGATCTTCCGCAGCCGGGATTTCGTCCAGCGGAAAGGCTTGAGGAAACGGGCAGACGTCTGGAAAACTTCTGCAAGAAGCTCAAGGTCCCATTTGAGTACAACTGCCTTGCACAGAAATGGGAAACTATCAGAGTTGAGGATCTCAAGATAGACAGGAATGAAGTAACTGTAGTTAACTGCTTGTACAGGTTGAAGAACCTGCCAGATGAGACTGTGGCAGTGAACTGTCCAAGAGATGCAGTGTTGAAGTTGATCAGGAAGATTAATCCAAACATTTTCATCCATGGGATAGTCAATGGCTCTTACAGTGCACCATTTTTCCTGACACGGTTCAGGGAGGCACTCTTCCACTTCTCAGCACTGTTTGATATGTTTGAGGTTAATGTGGCAAGTGAAGATACGGAGAGGATGCTGCTTGAGAAAGGGTTGTTTGGAAAGGATGCTATCAATGTCATAGCTTGTGAGGGGGCTGAGAGGGTTGAAAGGCCAGAGACCTACAAGCAGTGGCAGGTTAGGAACAAGAGAGCAGGGTTCAGGCAAATCCGGTTGGATCCAGAATTGGTGAATCAAGCGAAAGAAATGGTGAGGAAGGAATATCATAGAGATTTTGTAGTAGACGTGGATGGCAAGTGGGTTTTGCAGGGATGGAAAGGGCGTATTCTGAATGCCTTTTCTGTCTGGGTTCCTGCTTAA 1983 0.4624 MLSANPLVENFPGHVSVFPNQDPEMNGFNYEDSSSPSSGISSSGDSTEVTKYSNPILGYISDILMDEEDDLENKPCMLQECLRLQAAEKSFYDVLGRSYPSSPSQVRGCFPDENNPDGDFGRSTSFESYSTCTTDNSYESDWVNVVGEYESSLQQAPLADSPHDPFREYSQAAVLFHNGTIQSQSMPLMNGEDSSAAATTGSREKRSYQMDDTSHEQGGRGSKVSAVFSDDSEPPEILDEVLRVQIGRSQHCGGIEPSDKGILRPNVDSGGSSGKATRPKKVTNTATAVDLWTLLTQCAQAVANYDQRNANEILKQIRQHSSPYGDGLQRMAHYFANGLETRLAAGTPSYVPLEVATAADMLKAYKLYVTASPLQRLSNSLATKTIMKLVQNESSVHIIDFGICYGFQWPCLIKHLSERHGAIKLRITAVDLPQPGFRPAERLEETGRRLENFCKKLKVPFEYNCLAQKWETIRVEDLKIDRNEVTVVNCLYRLKNLPDETVAVNCPRDAVLKLIRKINPNIFIHGIVNGSYSAPFFLTRFREALFHFSALFDMFEVNVASEDTERMLLEKGLFGKDAINVIACEGAERVERPETYKQWQVRNKRAGFRQIRLDPELVNQAKEMVRKEYHRDFVVDVDGKWVLQGWKGRILNAFSVWVPA* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1737 660 MobiDBLite consensus disorder prediction 22 48 - -
Dod10g1737 660 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 16 659 - -
Dod10g1737 660 MobiDBLite consensus disorder prediction 13 48 - -
Dod10g1737 660 MobiDBLite consensus disorder prediction 253 281 - -
Dod10g1737 660 Pfam GRAS domain family 293 657 IPR005202 -
Dod10g1737 660 MobiDBLite consensus disorder prediction 184 204 - -
Dod10g1737 660 MobiDBLite consensus disorder prediction 184 231 - -
Dod10g1737 660 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 659 IPR005202 -
Dod10g1737 660 ProSiteProfiles GRAS family profile. 282 658 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1737 Dod-Chr10 38491407 38493780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1737 52 659 GRAS Transcription Factor Family AT2G29060 44.089 6.22e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod10g1737 GRAS 4.3e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1737 - - aprc:113855970 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1737 10 38491407 38493780 Dod10g1737 10 38491407 38493780 ECH
Dod10g1737 10 38491407 38493780 Dod03g2944 03 61682857 61686417 ECH