Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1736 ATGGATCCAAACTTCGTCGGAAACCACGATTTCGTAAGCGCTTACAAATTCAACGAAGACGGTGGTGCTCTGCTGTCCGATCTCAGCGATTGGGATCTGCAGGGACGCTGCAAGAACCCCTTTGATTTCGCGGCAGCAAGTGACCCTTTTTATCGACCTTATGCTGACCCATTTGGTTTTCCTGCAAATACGGTCCTGAGCTCTGAAGGGTTAGAGCCGTTTGTTCCATCTTCGCGCGTTGAAGAAGAAGAAGAAGAAACTGTGACGGGTTCAGCCTTCGGGGCTGTGGCTTCTTCTGTGGCGGATCCTTCAATGGAAGACACTGATTTTTCTGAAAACGTGAGGTACATAAGCCAGATTCTGATGGAGGAGAATTTTGAGGACATGCCATGCATGCGTTATGACCCATCAAGCCTTCAAGACACTGAGAAATCTTTCTATGATGCACTTGGAAAAAAATGGCCCCCTTCCCCCAATGAACACCCTCTTGACGTTCATCAGAATCTTGAGAGCCCTGATGGGGTTGGTTCCAGAAGCATCACCACTGATTCTTCTGGGAGCAGCACTAGCACTAGCACTAGCAGCAGCGAGAACCATCCAAATTCACAAGAGTTCAAAACCCTTTCTCCTGATACCCCTGTTTCTGGTGATGCTGCTTTGCAGTTCAATACTCATTCAGTGTCAAGCATGTCCTCTCAACTTGAACTTCAGCTTCCTGAGCATGCTTTGACTAGTATTAATGAAGGGGTGTTGGATTTGGATTCTTCTGTGATGAAGCTCTTGGCTCAGAATATCTTTAGTGATGCGGACTCTATACTGCAGTTTAAAAGAGGGTTGGAGGAAGCTAGTAAGTTTCTTCCTCCTGGGCCTAGGATTTTCACTGGCCTGGAGAGCAGCACAGTGCCCGCAGGAGAGCCGAAGGGAAAGGCCGAGATGGCTGCCGCGCCAGTCAAGGTGGAGAAGGCTGTTAGGGAGAGTAGTTCACATGGGTTGAAGAGTAGGAAGAACCATGAGCGCCAAGGCAATGATGGTGAAGAAGGAAGATGCAACAAGCAGTCTGCAGTTAGTGTTGAGGAGGAGAGTGAAATATCTGATATGTTCGACCAGGTGTTGCTTAGTGTTGAAAATGTGCCGCTGCGTGCTGAGCAGCAGGATGGATTGGTCGCGGACACACAGCCAATTGAACAATCACATCCATCTGAGGGAAGGAAGACTCGGTCCAAGAGAAAAGGCAAGAAGAAAGAAACTGTGGATCTGAGGACTCTTTTGGTCCTGTGTGCACAGGCTGTGTCCGCCGGTGACAACAGGACTGTTCATGAACTACTAAAGCAGATTAGGCAGCATTCTTCTTACTTAGGAGACGCATCACAGAGGATGGCTCATTTCTTTGCCAATGGCCTGGAGGCACGCATGGTTGGCACTAGCACGGGCACTGGAACACACACATTTTATACCACTCTGAGCTACAAGAAGTTCAGTGCTGCTGATTTTCTGAAAGCTTACCAACTTTTTATATCCGTTTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAAATGATTTTGAAGATAGCTGACAAGGCAGAAACCCTTCATATTATTGATTTTGGTATCTTGTATGGTTTCCAATGGCCAATACTTATCAAATTTTTGTCAAAAAGAAGCGGGGGACCTCCCAAGCTGCGCATCACAGGAATAGAGTATCCTCAGTCTGGCTTTCGTCCAGCAGAAAGAATTGAGGAGACTGGTCGTCGTCTGGCAAATTATTGCAAGCGTTTCAATGTTCCCTTTGAGTACAAAGCCATAGCATCACGAAACTGGGAGACCATTCAAATTGAAGAGCTTAAAATTGAGAGCAATGAAGTACTTGCCGTGAACTGTATGGTAAGGTTTAAGAATTTACTTGAGGAGACAATTGAAGTAAGCAGTCCTAGAAATGCAGTTCTGAATTTAATCAGGAGGATAAATCCTGATATCTTTGCTCTATCCATAACAAATGGATCCTATAATTCCCCTTTCTTTGCCACACGCTTCAGGGAGGCATTGTTCCATTATTCTTCACTATATGACATGTTTGCTACTCTCATACCCCCAGAAAATGAATGGAGGTTCATGCTTGAGAGAGAGTTTGTGGGACGGGAGATTATGAATGTTGTAGCATGCGAAGGTTATGAGAGGGTTGAGAGGCCTGAAACATACAAACACTGGCAGGCTAGGAATACAAGGGCTGGTTTTAGGCAGCTACCACTGGATAAGGAAATAATGGCCAAATTTAGGGAAAAGTTAAGGGAATGGTATCAACACCACAAAAATTTTATTTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCCTCCTCTTGTTGGGTGCCGGCATAA 2403 0.4557 MDPNFVGNHDFVSAYKFNEDGGALLSDLSDWDLQGRCKNPFDFAAASDPFYRPYADPFGFPANTVLSSEGLEPFVPSSRVEEEEEETVTGSAFGAVASSVADPSMEDTDFSENVRYISQILMEENFEDMPCMRYDPSSLQDTEKSFYDALGKKWPPSPNEHPLDVHQNLESPDGVGSRSITTDSSGSSTSTSTSSSENHPNSQEFKTLSPDTPVSGDAALQFNTHSVSSMSSQLELQLPEHALTSINEGVLDLDSSVMKLLAQNIFSDADSILQFKRGLEEASKFLPPGPRIFTGLESSTVPAGEPKGKAEMAAAPVKVEKAVRESSSHGLKSRKNHERQGNDGEEGRCNKQSAVSVEEESEISDMFDQVLLSVENVPLRAEQQDGLVADTQPIEQSHPSEGRKTRSKRKGKKKETVDLRTLLVLCAQAVSAGDNRTVHELLKQIRQHSSYLGDASQRMAHFFANGLEARMVGTSTGTGTHTFYTTLSYKKFSAADFLKAYQLFISVCPFKKFAHFFANKMILKIADKAETLHIIDFGILYGFQWPILIKFLSKRSGGPPKLRITGIEYPQSGFRPAERIEETGRRLANYCKRFNVPFEYKAIASRNWETIQIEELKIESNEVLAVNCMVRFKNLLEETIEVSSPRNAVLNLIRRINPDIFALSITNGSYNSPFFATRFREALFHYSSLYDMFATLIPPENEWRFMLEREFVGREIMNVVACEGYERVERPETYKHWQARNTRAGFRQLPLDKEIMAKFREKLREWYQHHKNFIFDEDNNWMLQGWKGRILYASSCWVPA* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1736 800 PANTHER SCARECROW-LIKE PROTEIN 34 88 799 - -
Dod10g1736 800 MobiDBLite consensus disorder prediction 385 414 - -
Dod10g1736 800 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 88 799 IPR005202 -
Dod10g1736 800 MobiDBLite consensus disorder prediction 322 346 - -
Dod10g1736 800 MobiDBLite consensus disorder prediction 300 361 - -
Dod10g1736 800 MobiDBLite consensus disorder prediction 172 218 - -
Dod10g1736 800 ProSiteProfiles GRAS family profile. 410 798 IPR005202 -
Dod10g1736 800 MobiDBLite consensus disorder prediction 149 218 - -
Dod10g1736 800 Pfam GRAS domain family 419 797 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1736 Dod-Chr10 38484308 38487029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1736 114 800 GRAS Transcription Factor Family AT1G07530 49.020 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod10g1736 GRAS 7.9e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1736 - - adu:107461599 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1736 10 38484308 38487029 Dod10g1736 10 38484308 38487029 ECH
Dod10g1736 10 38484308 38487029 Dod03g2944 03 61682857 61686417 PCT
Dod03g2945 03 61700927 61703506 Dod10g1736 10 38484308 38487029 PCT