Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1735 ATGAATTACCACACAAGCGACTTCAGTGCAACCTCCAGTAGTGGATTAAGACAGGTGGTAATCAAGACAGAAGTAGATGATGATGGTGAAGGGGAGCATTTTCTTGCTGAGTCAGAAGGAATCATCAGTAACAAGCAATCAGCAGTGCAAGTGGATGACAAAGAGCTATCAGAGTTATTTGATAAGGTACTGCTTGGCACTGGATTGGGGAAAGGGGCACATCCTAATGAAGAATCAAATTGGTCAAGTGGAGGAAAGAGCCGTGTAAGGAAACATGACCATAATGAGGAAGCTGTAGATTTGAGGACTCTATTGGTGCTGTGTGCACAAGCTGTTTCTTCTGATAATCGTTCATTAGCTAATGAGTTATTAATGCAGATTAAGCAGCATTCTTCTCCAACAGCTGATGCAACCCAGAGGTTGGCTCATTGCTTTGCAATTGCACTTGAAGCGCGCTTGGCTGGGAGCCGCGGCCACATTTCCAGCATGTTGTCCTCCAAAAGACCACCTCCTGCTGACATGATCAAAGCTTACCAAGTGTATTCTGCAGCGTGCCCATTTGACAAGCTTGCAATCATCTTTGCACTGAACTCAATTTGCAATGTAGCAAAAGAAGTTGAAACTCTTCACATTATAGATTTTGGTATCCTTTATGGCTTCAAGTGGCCTGCACTTATATATCGCTTATCGAAACGTGCTGGTGGACCGCCAAAGCTGCGGATCACAGGAATAGAGCTCCCCCAACCTGGTTTGAAGCTAAATGAAACAGGGCGTTGCTTGGCAAGGTATTGCAAACGCTTCAATGTTCCATTCGAGTTCAATGCTATTGTTGCAAAGAAATGGGAGACCATCAAAGTTGAGGATCTAAAGATCAATAGAAATGAATGTGTAGCTGTGAATTGTATGTTTCGATTTGAGAATCTACTTGATGAGACAGTCGTGTTGGACAGTCCTAGGGATGCTGTTTTGGACTTGATTAGGAAGGCAAATCCTAGGATATTTGTGCATGGCATTGTCAATGGTTCCTATGATGCGGCTTTCTTTGTGACACGGTTCAAAGAGGCACTATGTCATTACTCGGCATTGTTTGACATGCTTGACACCAATGTGGGTCGTGATGACCCCATGCGGTTGATGTTTGAGGGGGAGTTATTTGGGAGGGAAGTGGTGAATGTTGTAGCTTGTGAAGGTTGTGAGAGGGTGGAGAGGCCACATACATACAAGAAATGGCAACTTCGGAACATGAGGGCTGGGTTTAGGCAACTTCCATTGGATCACCAAGTCATTGAGAAATTAAGGTGTAGGTTGAGAGATGATGCGTACCATAGTGATTTCATGCTACATGTGGATGGAAATTGGGCCCTACAAGGTTGGAAGGGCAGAGTTCTATATGCTTCCTCATGTTGGGTACCTGCATAG 1419 0.444 MNYHTSDFSATSSSGLRQVVIKTEVDDDGEGEHFLAESEGIISNKQSAVQVDDKELSELFDKVLLGTGLGKGAHPNEESNWSSGGKSRVRKHDHNEEAVDLRTLLVLCAQAVSSDNRSLANELLMQIKQHSSPTADATQRLAHCFAIALEARLAGSRGHISSMLSSKRPPPADMIKAYQVYSAACPFDKLAIIFALNSICNVAKEVETLHIIDFGILYGFKWPALIYRLSKRAGGPPKLRITGIELPQPGLKLNETGRCLARYCKRFNVPFEFNAIVAKKWETIKVEDLKINRNECVAVNCMFRFENLLDETVVLDSPRDAVLDLIRKANPRIFVHGIVNGSYDAAFFVTRFKEALCHYSALFDMLDTNVGRDDPMRLMFEGELFGREVVNVVACEGCERVERPHTYKKWQLRNMRAGFRQLPLDHQVIEKLRCRLRDDAYHSDFMLHVDGNWALQGWKGRVLYASSCWVPA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1735 472 Pfam GRAS domain family 101 469 IPR005202 -
Dod10g1735 472 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 471 IPR005202 -
Dod10g1735 472 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 23 471 - -
Dod10g1735 472 MobiDBLite consensus disorder prediction 71 93 - -
Dod10g1735 472 ProSiteProfiles GRAS family profile. 92 470 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1735 Dod-Chr10 38456849 38458267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1735 29 472 GRAS Transcription Factor Family AT1G07530 56.716 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod10g1735 GRAS 1.2e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1735 - - aip:107614541 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1735 10 38456849 38458267 Dod10g1735 10 38456849 38458267 ECH
Dod10g1735 10 38456849 38458267 Dod03g2943 03 61676694 61680115 ECH
Dod10g1735 10 38456849 38458267 Dod03g2943 03 61676694 61680115 PCT
Dod03g2944 03 61682857 61686417 Dod10g1735 10 38456849 38458267 PCT