Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1712 ATGGAGAGTCAGGGTGGTGCAGAGGCAGAGAATGGAGTGGGAGGTGGATCAAGTGGCGGGAGTAGTAGTGCTTCTGGTTCGAGATGGAACCCTACGAAGGAGCAAATAAGCATGCTGGAGAGCCTGTATAAACAAGGGATAAGGACTCCCAGTGCTGAACAGATAGAGCAGATTACGGCGAGGCTCAGGGCCTATGGTCAGATCGAAGGGAAGAATGTGTTTTACTGGTTTCAGAATCACAAGGCCAGGCAGAGGCAGAGGCAGAAGCAAGAACGCACCACCAACGCCTATTTCAATCCTTTTCTTCATACCTCCCAGTACCCTGCAGCTTTCTCTTCTCCGCTTTGCCAAAATGTGGTCTACACCCCACCATATTGCCTGCCGCAGAGTGATCTTGGGTTTTACACTCAACACCCAAATGTGATCATACCCGGGCCTATTAGCCCAAGGGCTGAGAACATTGTTGGGCCCATGATAATGATGCCCAGAATGTGTGATGGCCCGCCTATATACGACCTCTTGCAACAGAGAATCCCTGATTATGGCTTTTGCAACAGTAACCGGAAAACGTTGGATCTCTTTCCCCAGCATCCTACTGGCACCTTGGAAGGGGAAACAACAGACCTTGTGGCATCCGCTGATTGTTCCATTGATACATCCTCTGCTAGTTCTGCTGTTATTGATGAATGTGGTCGTTCTGAAAATCAGCCTTACTTTGATTTTTTCACTTCGAGGCAAGAGTCTCGTTTGAATGATTAA 759 0.4862 MESQGGAEAENGVGGGSSGGSSSASGSRWNPTKEQISMLESLYKQGIRTPSAEQIEQITARLRAYGQIEGKNVFYWFQNHKARQRQRQKQERTTNAYFNPFLHTSQYPAAFSSPLCQNVVYTPPYCLPQSDLGFYTQHPNVIIPGPISPRAENIVGPMIMMPRMCDGPPIYDLLQQRIPDYGFCNSNRKTLDLFPQHPTGTLEGETTDLVASADCSIDTSSASSAVIDECGRSENQPYFDFFTSRQESRLND* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1712 252 CDD homeodomain 28 82 IPR001356 GO:0003677
Dod10g1712 252 MobiDBLite consensus disorder prediction 1 31 - -
Dod10g1712 252 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Dod10g1712 252 Pfam Homeodomain 27 86 IPR001356 GO:0003677
Dod10g1712 252 Gene3D - 17 98 - -
Dod10g1712 252 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 16 246 IPR044555 GO:0003700|GO:0099402
Dod10g1712 252 MobiDBLite consensus disorder prediction 15 31 - -
Dod10g1712 252 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 16 246 - -
Dod10g1712 252 SMART HOX_1 24 91 IPR001356 GO:0003677
Dod10g1712 252 SUPERFAMILY Homeodomain-like 21 92 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1712 Dod-Chr10 38262339 38263707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1712 10 243 Wox Gene Family AT5G59340 43.846 4.46e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod10g1712 Homeodomain 6.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1712 - - pvu:PHAVU_011G064900g 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1712 10 38262339 38263707 Dod10g1712 10 38262339 38263707 ECH